RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 UTS2BQ765I0 119 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 SESTD1Q86VW0 696 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 CHSY1Q86X52 802 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 POU5F2Q8N7G0 328 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 SHKBP1Q8TBC3 707 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 ADPGKQ9BRR6 497 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 STX18Q9P2W9 335 aaKnown RBP9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 TTLL3Q9Y4R7 772 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 EVPLQ92817 2033 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 MYO18AQ92614 2054 aaKnown RBP9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 DYTNA2CJ06 578 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZBTB42B2RXF5 422 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 NDUFB5O43674 189 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 CLPTM1O96005 669 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 TNNC2P02585 160 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 IL4RP24394 825 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 EFNA5P52803 228 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 NAA20P61599 178 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 PTPN11Q06124 597 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 MAP1SQ66K74 1059 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 TRMT10BQ6PF06 316 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 TSHZ1Q6ZSZ6 1077 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 NCCRP1Q6ZVX7 275 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 CAND1Q86VP6 1230 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ARID3BQ8IVW6 561 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZBTB8BQ8NAP8 495 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 RXFP2Q8WXD0 754 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ANKRD36BP1Q96IX9 119 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ACAP3Q96P50 834 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 DCUN1D5Q9BTE7 237 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 PTPRHQ9HD43 1115 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 MTO1Q9Y2Z2 717 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ANK1P16157 1881 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 SOWAHBA6NEL2 793 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 NDC80O14777 642 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 FOXD2O60548 495 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 HMGCRP04035 888 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 APRTP07741 180 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 CYP3A5P20815 502 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 NFKBIAP25963 317 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 RGS7P49802 495 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 GMPSP49915 693 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZNF280AP59817 542 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 DLG1Q12959 904 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 GRM1Q13255 1194 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 SMAD1Q15797 465 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 CA9Q16790 459 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ATF7IP2Q5U623 682 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZCCHC23Q6ZST2 131 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 GALNT4Q8N4A0 578 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 C12orf29Q8N999 325 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 GSTCDQ8NEC7 633 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 PPP2R3CQ969Q6 453 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 MCRS1Q96EZ8 462 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 HEXIM2Q96MH2 286 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 PRPF18Q99633 342 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 MRPL1Q9BYD6 325 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 RSAD1Q9HA92 442 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 AS3MTQ9HBK9 375 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 TRIP11Q15643 1979 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 F5H423 210 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 GPR25O00155 361 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 RFPL1O75677 317 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 CSH1P0DML2 217 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 CSH2P0DML3 217 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 PDGFRAP16234 1089 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 GRIA1P42261 906 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 TMED10P49755 219 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 CLCN3P51790 818 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 DCTN2Q13561 401 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 MPZL3Q6UWV2 235 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 SLC26A11Q86WA9 606 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 UNC5BQ8IZJ1 945 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 MPP5Q8N3R9 675 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 PLD5Q8N7P1 536 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 BCO2Q9BYV7 579 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 SPATA7Q9P0W8 599 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZNF212Q9UDV6 495 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZC3H7BQ9UGR2 993 aaKnown RBP9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 LTBP2Q14767 1821 aa9.7□□□□□ -0.86
HLA-DOA-201ENST00000229829 LACTBL1A8MY62 500 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 MED7O43513 233 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 PEX1O43933 1283 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 B4GALT4O60513 344 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ENDOD1O94919 500 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 TGDSO95455 350 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 RARBP10826 455 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 STIP1P31948 543 aaKnown RBP9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 AQP4P55087 323 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 MTTPP55157 894 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 TMPRSS15P98073 1019 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 CHI3L2Q15782 390 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 TREML2Q5T2D2 321 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 MROH9Q5TGP6 573 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 IER5Q5VY09 327 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 OR6B2Q6IFH4 312 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZBTB8OSQ8IWT0 167 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 RNF169Q8NCN4 708 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 OR6Y1Q8NGX8 325 aa9.69□□□□□ -0.86
HLA-DOA-201ENST00000229829 SEPT1Q8WYJ6 367 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms