RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 CNPY3Q9BT09 278 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 MRPL9Q9BYD2 267 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 SEZ6LQ9BYH1 1024 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 SIK2Q9H0K1 926 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 CHST7Q9NS84 486 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 AMHP03971 560 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 GM2AP17900 193 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 CHRNA3P32297 505 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 ITGA8P53708 1063 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 YWHAZP63104 245 aaKnown RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLMAPQ14BN4 828 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 KIAA0319Q5VV43 1072 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZNF280DQ6N043 979 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 FUT10Q6P4F1 479 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 CLEC20AQ6ZU45 233 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 DNAJC5GQ8N7S2 189 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 LRRC37BQ96QE4 947 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 HNRNPABQ99729 332 aaKnown RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 ARHGEF3Q9NR81 526 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 MGAMO43451 1857 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 SF3B1O75533 1304 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 GOLGA8RI6L899 631 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 MOCS2O96007 188 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 RARGP13631 454 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 RAB6CQ53S08 254 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 EFHC1Q5JVL4 640 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 ANO7Q6IWH7 933 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 SCAMP5Q8TAC9 235 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 RNF139Q8WU17 664 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 KLF6Q99612 283 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 RAB6CQ9H0N0 254 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 TRIP11Q15643 1979 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 TET1Q8NFU7 2136 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 LRCH4O75427 683 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 SNUPNO95149 360 aaKnown RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 DEFB103AP81534 67 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 MAPRE1Q15691 268 aaKnown RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 ARHGAP17Q68EM7 881 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 CGB2Q6NT52 195 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 ANKRD33Q7Z3H0 272 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 LRRTM3Q86VH5 581 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 LRRC43Q8N309 656 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 SUSD3Q96L08 255 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 NPHS2Q9NP85 383 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 DDIT4Q9NX09 232 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 CORO1CQ9ULV4 474 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 STAP1Q9ULZ2 295 aa12.12□□□□□ -0.47
TNFAIP1-201ENST00000226225 CST8O60676 142 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 PFKMP08237 780 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 RCN2Q14257 317 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 BTBD8Q5XKL5 378 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 C1orf228Q6PIY5 440 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 COLGALT2Q8IYK4 626 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 GIPC2Q8TF65 315 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 RAB3IPQ96QF0 476 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 ACBD6Q9BR61 282 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 TMLHEQ9NVH6 421 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 NAALADL1Q9UQQ1 740 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 CDY1Q9Y6F8 540 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 GOLGA8MH3BSY2 632 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 XPO1O14980 1071 aaKnown RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 TJP3O95049 919 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 LUC7L3O95232 432 aaKnown RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 PTDSS1P48651 473 aaKnown RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 NUMBP49757 651 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 PAPOLAP51003 745 aaKnown RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 DEUP1Q05D60 604 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 TCTN1Q2MV58 587 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 RFWD3Q6PCD5 774 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 ISLR2Q6UXK2 745 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 TMEM173Q86WV6 379 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 FAM13CQ8NE31 585 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 AUTS2Q8WXX7 1259 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 HSFY1Q96LI6 401 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 TOX2Q96NM4 488 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 TRAIPQ9BWF2 469 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 SGK1O00141 431 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 UNC5CO95185 931 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZBED1O96006 694 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 GALTP07902 379 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 UBTFL6P0CB48 400 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 CDH5P33151 784 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 OR1D2P34982 312 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 CPA2P48052 419 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZNF143P52747 638 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 CACNA2D1P54289 1103 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 DUSP4Q13115 394 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 GPNMBQ14956 572 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 CNKSR3Q6P9H4 555 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 RCOR2Q8IZ40 523 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms