RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SLC22A9Q8IVM8 553 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 PHF21BQ96EK2 531 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 MRPS26Q9BYN8 205 aaKnown RBP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 HEY2Q9UBP5 337 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 FAM220BPB1ANY3 271 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 AKR1A1P14550 325 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 PSEN2P49810 448 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 ST13P50502 369 aaKnown RBP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CCZ1BP86790 482 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CCZ1P86791 482 aaPredicted RBP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 VAC14Q08AM6 782 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 HDDC2Q7Z4H3 204 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CASKIN2Q8WXE0 1202 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CNPY3Q9BT09 278 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 RNF208Q9H0X6 261 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 KPNA3O00505 521 aaPredicted RBP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 MPOP05164 745 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 TPBGLP0DKB5 382 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CCDC130P13994 396 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 PKN1Q16512 942 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 FBXW10Q5XX13 1052 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 PDPK2PQ6A1A2 396 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 MRPL9Q9BYD2 267 aaKnown RBP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 EFCAB1Q9HAE3 211 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 NDST1P52848 882 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 PTPN11Q06124 597 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-201ENST00000225964 FIG4Q92562 907 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 PRKAG3Q9UGI9 489 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 ZMYM5Q9UJ78 669 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 ADAM30Q9UKF2 790 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 TRPV2Q9Y5S1 764 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 SNX13Q9Y5W8 968 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 BCL2L1Q07817 233 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 NFIAQ12857 509 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 BNC2Q6ZN30 1099 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-201ENST00000225964 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 TC2NQ8N9U0 490 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 WDR36Q8NI36 951 aaKnown RBP13.56□□□□□ -0.24
COL1A1-201ENST00000225964 ELMO3Q96BJ8 720 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 DPY30Q9C005 99 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 ZNF518BQ9C0D4 1074 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 CYP3A43Q9HB55 503 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 VPS51Q9UID3 782 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 MED14O60244 1454 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 O00370 1275 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 TYMPP19971 482 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 MPP3Q13368 585 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 CXorf40AQ8TE69 158 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 SH3GL1Q99961 368 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 COMMD8Q9NX08 183 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 ABCA6Q8N139 1617 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 PXDNLA1KZ92 1463 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 OR6A2O95222 327 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 LSP1P33241 339 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 HSD17B3P37058 310 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 FSCN1Q16658 493 aaKnown RBP13.56□□□□□ -0.24
COL1A1-201ENST00000225964 SUGP1Q8IWZ8 645 aaKnown RBP13.56□□□□□ -0.24
COL1A1-201ENST00000225964 CATSPER2Q96P56 530 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 MIR1-1HGQ9H1L0 117 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 VIPAS39Q9H9C1 493 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 MYPNQ86TC9 1320 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 A0A0A6YYK5 440 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-201ENST00000225964 TEX28O15482 410 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 KLHL41O60662 606 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 TSC22D2O75157 780 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 SERPINF2P08697 491 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 RETSATQ6NUM9 610 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 DET1Q7L5Y6 550 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 C3orf20Q8ND61 904 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 TBL1YQ9BQ87 522 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 GLIS2Q9BZE0 524 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-201ENST00000225964 HDHD2Q9H0R4 259 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 TSPAN16Q9UKR8 245 aa13.56□□□□□ -0.24
COL1A1-201ENST00000225964 NEXMIFQ5QGS0 1516 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 LRRC14BA6NHZ5 514 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 ZNF839A8K0R7 811 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 SH3BGRLO75368 114 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 INTS5Q6P9B9 1019 aaKnown RBP13.55□□□□□ -0.24
COL1A1-201ENST00000225964 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 ADAM32Q8TC27 787 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 USP6NLQ92738 828 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 TRIT1Q9H3H1 467 aaKnown RBP13.55□□□□□ -0.24
COL1A1-201ENST00000225964 AVENQ9NQS1 362 aaPredicted RBP13.55□□□□□ -0.24
COL1A1-201ENST00000225964 MRPL17Q9NRX2 175 aaKnown RBP13.55□□□□□ -0.24
COL1A1-201ENST00000225964 BARX2Q9UMQ3 279 aaPredicted RBP13.55□□□□□ -0.24
COL1A1-201ENST00000225964 TMEM114B3SHH9 223 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 ATP12AP54707 1039 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 PPP4CP60510 307 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 CES5AQ6NT32 575 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 FOXR1Q6PIV2 292 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 KIAA1324Q6UXG2 1013 aaKnown RBP13.55□□□□□ -0.24
COL1A1-201ENST00000225964 TMEM26Q6ZUK4 368 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 LRRC6Q86X45 466 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 OR8H2Q8N162 312 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 UTP15Q8TED0 518 aaKnown RBP13.55□□□□□ -0.24
COL1A1-201ENST00000225964 RSPH1Q8WYR4 309 aa13.55□□□□□ -0.24
COL1A1-201ENST00000225964 SUSD6Q92537 303 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms