RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CDHR3Q6ZTQ4 885 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 BNIPLQ7Z465 357 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 ADGRF2Q8IZF7 708 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 DEPDC1BQ8WUY9 529 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 RNPEPL1Q9HAU8 725 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 GJD2Q9UKL4 321 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 GOT1P17174 413 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 CALB2P22676 271 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 AKAP5P24588 427 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 MRPS5P82675 430 aaKnown RBP22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 SNX17Q15036 470 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 PDK1Q15118 436 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 KYAT3Q6YP21 454 aaKnown RBP22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 DEFB106AQ8N104 65 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 NSMCE1Q8WV22 266 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 BRI3BPQ8WY22 251 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 NT5C3BQ969T7 300 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 OXNAD1Q96HP4 312 aaPredicted RBP22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 BTBD10Q9BSF8 475 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 APOL6Q9BWW8 343 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 STAP1Q9ULZ2 295 aa22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 PIN4Q9Y237 131 aaKnown RBP22.68■■□□□ 1.22
SMARCD2-201ENST00000225742 FAM110CQ1W6H9 321 aa22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 UBXN11Q5T124 520 aa22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 NUDCD3Q8IVD9 361 aa22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 ENDOVQ8N8Q3 282 aaKnown RBP22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 B3GALNT2Q8NCR0 500 aa22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 CDKL2Q92772 493 aa22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 PARK7Q99497 189 aaKnown RBP22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 ARHGEF4Q9NR80 690 aa22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 RAD54BQ9Y620 910 aa22.67■■□□□ 1.22
SMARCD2-201ENST00000225742 DYNC1LI2O43237 492 aaPredicted RBP22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 HCRTO43612 131 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 VAV1P15498 845 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 EPHB2P29323 1055 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 LRPAP1P30533 357 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 AIF1P55008 147 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 ADAM17P78536 824 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 MFSD10Q14728 455 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 TRMT10BQ6PF06 316 aaKnown RBP22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 PIGZQ86VD9 579 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 NDUFAF2Q8N183 169 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 MPP5Q8N3R9 675 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 NPY6RQ99463 290 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 GEMIN8Q9NWZ8 242 aaKnown RBP22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 PPP1R12AO14974 1030 aaPredicted RBP22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 PEX11AO75192 247 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 MYL2P10916 166 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 SERPINB3P29508 390 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 TMPRSS15P98073 1019 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 OCRLQ01968 901 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 PAFAH1B3Q15102 231 aaKnown RBP22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 DENND5BQ6ZUT9 1274 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 COLGALT1Q8NBJ5 622 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 ARMC2Q8NEN0 867 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 NPLOC4Q8TAT6 608 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 RNF139Q8WU17 664 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 SLC2A13Q96QE2 648 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 SLC9A7Q96T83 725 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 SIKE1Q9BRV8 207 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 SPON1Q9HCB6 807 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 ARL8BQ9NVJ2 186 aa22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 GNEQ9Y223 722 aaKnown RBP22.66■■□□□ 1.22
SMARCD2-201ENST00000225742 SCN4AP35499 1836 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 UGT1A9O60656 530 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 BPGMP07738 259 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 PGAM1P18669 254 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 BST1Q10588 318 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 BMPR2Q13873 1038 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 PDZD4Q76G19 769 aaPredicted RBP22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 NME8Q8N427 588 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 MMADHCQ9H3L0 296 aaPredicted RBP22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 UGT1A7Q9HAW7 530 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 UGT1A10Q9HAW8 530 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 UGT1A8Q9HAW9 530 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 NUMBLQ9Y6R0 609 aa22.65■■□□□ 1.22
SMARCD2-201ENST00000225742 HMX2A2RU54 273 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 HAS3O00219 553 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 ADCY6O43306 1168 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 DIAPH2O60879 1101 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 FBXO21O94952 628 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 NPR3P17342 541 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 TKTP29401 623 aaKnown RBP22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 PSEN2P49810 448 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 CRYBB1P53674 252 aaPredicted RBP22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 LILRA4P59901 499 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 NIPAL4Q0D2K0 466 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 ADIGQ0VDE8 80 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 TEX44Q53QW1 395 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 OSTM1Q86WC4 334 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 FAM131BQ86XD5 332 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 CRLF3Q8IUI8 442 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 STKLD1Q8NE28 680 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 LRRN4Q8WUT4 740 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 DNAJB3Q8WWF6 145 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 N4BP2L2Q92802 583 aaPredicted RBP22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 MAGEB5Q9BZ81 275 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 SLC13A1Q9BZW2 595 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 WWP1Q9H0M0 922 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 PCMTD2Q9NV79 361 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms