RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 KCNT1Q5JUK3 1230 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 NUGGCQ68CJ6 796 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 UNC45BQ8IWX7 931 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 UBL4BQ8N7F7 174 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 C1orf74Q96LT6 269 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 NECTIN4Q96NY8 510 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 NAPGQ99747 312 aaPredicted RBP14.57□□□□□ -0.08
SEC61B-201ENST00000223641 NACA2Q9H009 215 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 OSBPL2Q9H1P3 480 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 UBE2ZQ9H832 354 aaPredicted RBP14.57□□□□□ -0.08
SEC61B-201ENST00000223641 TRPV4Q9HBA0 871 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 TDP1Q9NUW8 608 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 DDX56Q9NY93 547 aaKnown RBP14.57□□□□□ -0.08
SEC61B-201ENST00000223641 COX16Q9P0S2 106 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 CD207Q9UJ71 328 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 STOML2Q9UJZ1 356 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 SNX12Q9UMY4 172 aa14.57□□□□□ -0.08
SEC61B-201ENST00000223641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.57□□□□□ -0.08
SEC61B-201ENST00000223641 C3orf70A6NLC5 250 aaPredicted RBP14.56□□□□□ -0.08
SEC61B-201ENST00000223641 CES2O00748 559 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 LATS1O95835 1130 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 KLKB1P03952 638 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 CASQ1P31415 396 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 L1CAMP32004 1257 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 AVPR1AP37288 418 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 SSR1P43307 286 aaKnown RBP14.56□□□□□ -0.08
SEC61B-201ENST00000223641 MLLT6P55198 1093 aaPredicted RBP14.56□□□□□ -0.08
SEC61B-201ENST00000223641 RWDD2BP57060 319 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 AMPD2Q01433 879 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 NRG1Q02297 640 aaPredicted RBP14.56□□□□□ -0.08
SEC61B-201ENST00000223641 CBX2Q14781 532 aaPredicted RBP14.56□□□□□ -0.08
SEC61B-201ENST00000223641 TAZQ16635 292 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 CA9Q16790 459 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 SMTNL2Q2TAL5 461 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 ACBD5Q5T8D3 534 aaPredicted RBP14.56□□□□□ -0.08
SEC61B-201ENST00000223641 DCAF12L1Q5VU92 463 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 Q6ZNB5 142 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 HTR3DQ70Z44 454 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 VSIG1Q86XK7 387 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 ARID3BQ8IVW6 561 aaPredicted RBP14.56□□□□□ -0.08
SEC61B-201ENST00000223641 KIAA1958Q8N8K9 716 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 EXD1Q8NHP7 514 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 ING5Q8WYH8 240 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 USP13Q92995 863 aaPredicted RBP14.56□□□□□ -0.08
SEC61B-201ENST00000223641 WBP2Q969T9 261 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 BTN2A3PQ96KV6 586 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 MAGEB5Q9BZ81 275 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 CARD9Q9H257 536 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 POMKQ9H5K3 350 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 ZWILCHQ9H900 591 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 TMPRSS4Q9NRS4 437 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 CDH7Q9ULB5 785 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 AP4E1Q9UPM8 1137 aa14.56□□□□□ -0.08
SEC61B-201ENST00000223641 ZNF487B1APH4 448 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 LEFTY2O00292 366 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 PAGE1O75459 146 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 ZRANB2O95218 330 aaKnown RBP eCLIP14.55□□□□□ -0.08
SEC61B-201ENST00000223641 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 APOEP02649 317 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 PYGMP11217 842 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 KDELR1P24390 212 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 IL4RP24394 825 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 PDK2Q15119 407 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 CCDC85BQ15834 202 aaPredicted RBP14.55□□□□□ -0.08
SEC61B-201ENST00000223641 EP400NLQ6ZTU2 488 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 DDX42Q86XP3 938 aaKnown RBP eCLIP14.55□□□□□ -0.08
SEC61B-201ENST00000223641 FAM217AQ8IXS0 508 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 RCOR2Q8IZ40 523 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 ATP6V0D2Q8N8Y2 350 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 RAPGEF5Q92565 580 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 TSC1Q92574 1164 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 RNF34Q969K3 372 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 ASB16Q96NS5 453 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 PRMT1Q99873 361 aaKnown RBP14.55□□□□□ -0.08
SEC61B-201ENST00000223641 DCLK3Q9C098 648 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 KIF9Q9HAQ2 790 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 SMPD4Q9NXE4 827 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 SLC12A6Q9UHW9 1150 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 XPO7Q9UIA9 1087 aaKnown RBP14.55□□□□□ -0.08
SEC61B-201ENST00000223641 CCL26Q9Y258 94 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 USP15Q9Y4E8 981 aaPredicted RBP14.55□□□□□ -0.08
SEC61B-201ENST00000223641 HS3ST4Q9Y661 456 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 ZFP37Q9Y6Q3 630 aaPredicted RBP14.55□□□□□ -0.08
SEC61B-201ENST00000223641 C5orf42Q9H799 3197 aa14.55□□□□□ -0.08
SEC61B-201ENST00000223641 E2F8A0AVK6 867 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 GRXCR2A6NFK2 248 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 H3BQ06 376 aaPredicted RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 GFRA2O00451 464 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 MBTPS2O43462 519 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 ACSL4O60488 711 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 HMBSP08397 361 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 TCP1P17987 556 aaKnown RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 HARS2P49590 506 aaKnown RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 ZNF135P52742 658 aaPredicted RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 COPS2P61201 443 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 USP4Q13107 963 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 SMAD4Q13485 552 aaKnown RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 ZNF77Q15935 545 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 FAM133BQ5BKY9 247 aaKnown RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 MS4A13Q5J8X5 152 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms