RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 RENBPP51606 427 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 MRPS35P82673 323 aaKnown RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 BTKQ06187 659 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 HIST2H2ACQ16777 129 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 HIST2H2AA3Q6FI13 130 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 FBXO44Q9H4M3 255 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 NWD2Q9ULI1 1742 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 NCF1BA6NI72 391 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 NCF1CA8MVU1 366 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 E5RJQ4 531 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 AKR1A1P14550 325 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 NCF1P14598 390 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 RAB27AP51159 221 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 RASA2Q15283 850 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 ASTE1Q2TB18 679 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 CARNMT1Q8N4J0 409 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 LNX1Q8TBB1 728 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 CYP39A1Q9NYL5 469 aa11.82□□□□□ -0.52
NOD1-201ENST00000222823 PNMA8BQ9ULN7 279 aaPredicted RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 EIF3LQ9Y262 564 aaKnown RBP11.82□□□□□ -0.52
NOD1-201ENST00000222823 RAMP2O60895 175 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 TPH1P17752 444 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 CALB2P22676 271 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 AXLP30530 894 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 SLC6A3Q01959 620 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 ACVR2BQ13705 512 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 SDE2Q6IQ49 451 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 PTAR1Q7Z6K3 402 aaPredicted RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 TFAP2DQ7Z6R9 452 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 P3H2Q8IVL5 708 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 IQCKQ8N0W5 287 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 ADAM32Q8TC27 787 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 APBB2Q92870 758 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 HES6Q96HZ4 224 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 TMEM134Q9H6X4 195 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 DLGAP2Q9P1A6 1054 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 UBR2Q8IWV8 1755 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 TTLL13PA6NNM8 815 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 APOC4-APOC2K7ER74 178 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 APOC2P02655 101 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 LGALS2P05162 132 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 SERPINB10P48595 397 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 MFSD10Q14728 455 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 WLSQ5T9L3 541 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 CACHD1Q5VU97 1274 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 IQSEC1Q6DN90 963 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 TMEM161BQ8NDZ6 487 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 TCP10LQ8TDR4 215 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 ADGRE3Q9BY15 652 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 UTP6Q9NYH9 597 aaKnown RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 DOLKQ9UPQ8 538 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 UBIAD1Q9Y5Z9 338 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 CICQ96RK0 1608 aaPredicted RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 SRRM3A6NNA2 597 aaPredicted RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 E9PBE3 544 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 KLHL41O60662 606 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 RECQL4O94761 1208 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 NR2C2P49116 596 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 KPNA1P52294 538 aaPredicted RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 IFI35P80217 286 aaPredicted RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 CCDC85BQ15834 202 aaPredicted RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 PPP4R4Q6NUP7 873 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 TMC7Q7Z402 723 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 SCUBE1Q8IWY4 988 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 MYO1HQ8N1T3 1032 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 MBOAT7Q96N66 472 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 DMAP1Q9NPF5 467 aaPredicted RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 TLR8Q9NR97 1041 aaKnown RBP11.81□□□□□ -0.52
NOD1-201ENST00000222823 TBC1D13Q9NVG8 400 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 NINJ2Q9NZG7 142 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 NFASCO94856 1347 aa11.81□□□□□ -0.52
NOD1-201ENST00000222823 LZTS3O60299 673 aaPredicted RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 PLA2G6O60733 806 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 APOA1P02647 267 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 ALBP02768 609 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 UBTFL6P0CB48 400 aaPredicted RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 ITGB5P18084 799 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 GLRA2P23416 452 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 PLOD1Q02809 727 aaPredicted RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 WASHC5Q12768 1159 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 ITGA9Q13797 1035 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 VGLL4Q14135 290 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 CATSPERGQ6ZRH7 1159 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 UCMAQ8WVF2 138 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 SMARCD1Q96GM5 515 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 CCT7Q99832 543 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 TMEM120AQ9BXJ8 343 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 DCLRE1BQ9H816 532 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 TAS2R14Q9NYV8 317 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 CDV3Q9UKY7 258 aaKnown RBP11.8□□□□□ -0.52
NOD1-201ENST00000222823 PDE4DIPQ5VU43 2346 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 MAN1A2O60476 641 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 ACADSP16219 412 aa11.8□□□□□ -0.52
NOD1-201ENST00000222823 CD151P48509 253 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms