RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MPHOSPH6Q99547 160 aaKnown RBP17.83■□□□□ 0.44
USB1-201ENST00000219281 TSC22D3Q99576 134 aa17.83■□□□□ 0.44
USB1-201ENST00000219281 B3GNT5Q9BYG0 378 aa17.83■□□□□ 0.44
USB1-201ENST00000219281 RNPEPQ9H4A4 650 aa17.83■□□□□ 0.44
USB1-201ENST00000219281 SMARCAD1Q9H4L7 1026 aa17.83■□□□□ 0.44
USB1-201ENST00000219281 FAM49BQ9NUQ9 324 aa17.83■□□□□ 0.44
USB1-201ENST00000219281 KIAA1257Q9ULG3 409 aa17.83■□□□□ 0.44
USB1-201ENST00000219281 SDR42E2A6NKP2 422 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 ITM2AO43736 263 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 ADORA2AP29274 412 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 ACTR3P61158 418 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 AMHR2Q16671 573 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 NBPF20Q3BBV1 942 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 THEMIS2Q5TEJ8 643 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 C1orf146Q5VVC0 180 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 KCNT2Q6UVM3 1135 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 TIFABQ6ZNK6 161 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 ARCQ7LC44 396 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 ACOT1Q86TX2 421 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 MYLK4Q86YV6 388 aaPredicted RBP17.82■□□□□ 0.44
USB1-201ENST00000219281 APLFQ8IW19 511 aaPredicted RBP17.82■□□□□ 0.44
USB1-201ENST00000219281 SLC25A41Q8N5S1 370 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 DHX35Q9H5Z1 703 aaKnown RBP17.82■□□□□ 0.44
USB1-201ENST00000219281 WDR27A2RRH5 827 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 PAPSS1O43252 624 aaPredicted RBP17.82■□□□□ 0.44
USB1-201ENST00000219281 GABBR2O75899 941 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 L1CAMP32004 1257 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 RPL10AP62906 217 aaKnown RBP17.82■□□□□ 0.44
USB1-201ENST00000219281 SNAPC2Q13487 334 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 TBCCQ15814 346 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 DENND5BQ6ZUT9 1274 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 TTC1Q99614 292 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 MOCS1Q9NZB8 636 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 ITGA11Q9UKX5 1188 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 DNAJC16Q9Y2G8 782 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 ASB3Q9Y575 518 aa17.82■□□□□ 0.44
USB1-201ENST00000219281 C22orf31O95567 290 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 BAG2O95816 211 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 GSRP00390 522 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 C6orf222P0C671 652 aaPredicted RBP17.81■□□□□ 0.44
USB1-201ENST00000219281 CACNA2D1P54289 1103 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 CRADDP78560 199 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 GJC2Q5T442 439 aaPredicted RBP17.81■□□□□ 0.44
USB1-201ENST00000219281 CASC4Q6P4E1 433 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 PHC3Q8NDX5 983 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 SLC10A4Q96EP9 437 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 ZNF778Q96MU6 729 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 MRPL45Q9BRJ2 306 aaKnown RBP17.81■□□□□ 0.44
USB1-201ENST00000219281 SLC4A5Q9BY07 1137 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 MAGEA13PA6NCF6 341 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 A6NJR5 290 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 FESP07332 822 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 DESP17661 470 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 ARF4P18085 180 aaPredicted RBP17.81■□□□□ 0.44
USB1-201ENST00000219281 AP2B1P63010 937 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 N4BP2L1Q5TBK1 243 aaPredicted RBP17.81■□□□□ 0.44
USB1-201ENST00000219281 MBLAC2Q68D91 279 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 KYAT3Q6YP21 454 aaKnown RBP17.81■□□□□ 0.44
USB1-201ENST00000219281 WDR75Q8IWA0 830 aaKnown RBP17.81■□□□□ 0.44
USB1-201ENST00000219281 SHKBP1Q8TBC3 707 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 CLEC4CQ8WTT0 213 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 GATA6Q92908 595 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 NFKBIZQ9BYH8 718 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 PIDD1Q9HB75 910 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 PIH1D1Q9NWS0 290 aaKnown RBP17.81■□□□□ 0.44
USB1-201ENST00000219281 EMCNQ9ULC0 261 aa17.81■□□□□ 0.44
USB1-201ENST00000219281 USP1O94782 785 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 ATP5BP06576 529 aaKnown RBP17.8■□□□□ 0.44
USB1-201ENST00000219281 KCNA4P22459 653 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 SLC1A6P48664 564 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 TUBB3Q13509 450 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 SEMA5AQ13591 1074 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 PKDCCQ504Y2 493 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 TEDDM1Q5T9Z0 273 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 HEATR6Q6AI08 1181 aaKnown RBP17.8■□□□□ 0.44
USB1-201ENST00000219281 IZUMO2Q6UXV1 221 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 TMEM110Q86TL2 294 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 PIWIL2Q8TC59 973 aaKnown RBP17.8■□□□□ 0.44
USB1-201ENST00000219281 KIF12Q96FN5 646 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 QKIQ96PU8 341 aaKnown RBP eCLIP17.8■□□□□ 0.44
USB1-201ENST00000219281 LPIN3Q9BQK8 851 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 GCOM2Q9BZD3 368 aaPredicted RBP17.8■□□□□ 0.44
USB1-201ENST00000219281 C1orf21Q9H246 121 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 NDE1Q9NXR1 346 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 HESX1Q9UBX0 185 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 AKT3Q9Y243 479 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 MFHAS1Q9Y4C4 1052 aa17.8■□□□□ 0.44
USB1-201ENST00000219281 TPP1O14773 563 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 AHCYL1O43865 530 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 FGF3P11487 239 aaPredicted RBP17.79■□□□□ 0.44
USB1-201ENST00000219281 GNAT1P11488 350 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 CPOXP36551 454 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 SLC26A2P50443 739 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 SLC25A3Q00325 362 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 STILQ15468 1287 aa17.79■□□□□ 0.44
USB1-201ENST00000219281 SMAD1Q15797 465 aaKnown RBP17.79■□□□□ 0.44
USB1-201ENST00000219281 DPYSL2Q16555 572 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms