RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 OR4Q2P0C623 313 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 CYP2C18P33260 490 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 MAGEA6P43360 314 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 ELAVL2Q12926 359 aaKnown RBP17.98■□□□□ 0.47
VRK1-201ENST00000216639 CCDC38Q502W7 563 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 ZNF280DQ6N043 979 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 TDRPQ86YL5 185 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 NPAS4Q8IUM7 802 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 SCN4BQ8IWT1 228 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 ZNF784Q8NCA9 323 aaPredicted RBP17.98■□□□□ 0.47
VRK1-201ENST00000216639 FBXO36Q8NEA4 188 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 CCDC110Q8TBZ0 833 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 DQX1Q8TE96 717 aaKnown RBP17.98■□□□□ 0.47
VRK1-201ENST00000216639 TKTL2Q9H0I9 626 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 PCDHB5Q9Y5E4 795 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 NLRC5Q86WI3 1866 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 TNFRSF10BO14763 440 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 NCAM2O15394 837 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 MFSD11O43934 449 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 MYCP01106 439 aaPredicted RBP17.98■□□□□ 0.47
VRK1-201ENST00000216639 GAD2Q05329 585 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 IFRD2Q12894 506 aaPredicted RBP17.98■□□□□ 0.47
VRK1-201ENST00000216639 CBLBQ13191 982 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 SEMA3BQ13214 749 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 KLHL38Q2WGJ6 581 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 CTXN3Q4LDR2 81 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 FAM171A1Q5VUB5 890 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 TAC4Q86UU9 113 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 EXOC3L1Q86VI1 746 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 CEP57Q86XR8 500 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 SCAMP5Q8TAC9 235 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 C8orf48Q96LL4 319 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 TMEM175Q9BSA9 504 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 FBXO44Q9H4M3 255 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 ETNK1Q9HBU6 452 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 FETUBQ9UGM5 382 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 SLC24A2Q9UI40 661 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 PATJQ8NI35 1801 aa17.98■□□□□ 0.47
VRK1-201ENST00000216639 PTPRDP23468 1912 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 DCLK1O15075 740 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 SPAG6O75602 509 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 CCL5P13501 91 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 GLUD2P49448 558 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 MSS51Q4VC12 460 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 CAPN12Q6ZSI9 719 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 TADA2BQ86TJ2 420 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 MCUQ8NE86 351 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 HIPK3Q9H422 1215 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 ACTL7BQ9Y614 415 aa17.97■□□□□ 0.47
VRK1-201ENST00000216639 COL4A4P53420 1690 aaPredicted RBP17.96■□□□□ 0.47
VRK1-201ENST00000216639 A0A0A0MRY4 1105 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 APRTP07741 180 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 CHN1P15882 459 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 ERCC2P18074 760 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 TPSB2P20231 275 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 SERPINB6P35237 376 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 FDFT1P37268 417 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 MAGEA11P43364 429 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 SARNPP82979 210 aaKnown RBP17.96■□□□□ 0.47
VRK1-201ENST00000216639 AP1B1Q10567 949 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 PRKD1Q15139 912 aaPredicted RBP17.96■□□□□ 0.47
VRK1-201ENST00000216639 RASA2Q15283 850 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 MTFR1Q15390 333 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 TPSAB1Q15661 275 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 BRMS1LQ5PSV4 323 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 C3orf62Q6ZUJ4 267 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 ANKRD33Q7Z3H0 272 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 NUP93Q8N1F7 819 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 ARHGAP18Q8N392 663 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 CCNYQ8ND76 341 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 SPATA13Q96N96 652 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 OXCT2Q9BYC2 517 aaPredicted RBP17.96■□□□□ 0.47
VRK1-201ENST00000216639 BRD8Q9H0E9 1235 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 CTNNAL1Q9UBT7 734 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 OR12D3Q9UGF7 316 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 TBK1Q9UHD2 729 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 MFHAS1Q9Y4C4 1052 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 CENPFP49454 3210 aa17.96■□□□□ 0.47
VRK1-201ENST00000216639 POC1B-GALNT4F8VUJ3 575 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 H7C4K7 107 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 NDUFAB1O14561 156 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 OPHN1O60890 802 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 BANF1O75531 89 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 IGLV3-25P01717 112 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 GEMIN4P57678 1058 aaKnown RBP17.95■□□□□ 0.46
VRK1-201ENST00000216639 GPX6P59796 221 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 SMARCB1Q12824 385 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 MRPL58Q14197 206 aaKnown RBP17.95■□□□□ 0.46
VRK1-201ENST00000216639 ANKRD20A2Q5SQ80 823 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 ANKRD20A1Q5TYW2 823 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 ANKRD20A3Q5VUR7 823 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 LGMNQ99538 433 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 OSBPL2Q9H1P3 480 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 SMOC2Q9H3U7 446 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 PPANQ9NQ55 473 aaKnown RBP17.95■□□□□ 0.46
VRK1-201ENST00000216639 INTS9Q9NV88 658 aaKnown RBP17.95■□□□□ 0.46
VRK1-201ENST00000216639 CLUHO75153 1309 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 TBKBP1A7MCY6 615 aa17.95■□□□□ 0.46
VRK1-201ENST00000216639 FAM72CH0Y354 149 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms