RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 BYSLQ13895 437 aaKnown RBP23.09■■□□□ 1.29
VTI1B-201ENST00000216456 SH3PXD2AQ5TCZ1 1133 aa23.09■■□□□ 1.29
VTI1B-201ENST00000216456 DENND1BQ6P3S1 775 aa23.09■■□□□ 1.29
VTI1B-201ENST00000216456 ANKS1BQ7Z6G8 1248 aa23.09■■□□□ 1.29
VTI1B-201ENST00000216456 TRIML1Q8N9V2 468 aa23.09■■□□□ 1.29
VTI1B-201ENST00000216456 CYB5D2Q8WUJ1 264 aa23.09■■□□□ 1.29
VTI1B-201ENST00000216456 HSPA12BQ96MM6 686 aa23.09■■□□□ 1.29
VTI1B-201ENST00000216456 ABCC13Q9NSE7 274 aa23.09■■□□□ 1.29
VTI1B-201ENST00000216456 OLA1Q9NTK5 396 aaKnown RBP23.09■■□□□ 1.29
VTI1B-201ENST00000216456 EVLQ9UI08 416 aaPredicted RBP23.09■■□□□ 1.29
VTI1B-201ENST00000216456 HBS1LQ9Y450 684 aaKnown RBP23.09■■□□□ 1.29
VTI1B-201ENST00000216456 EPG5Q9HCE0 2579 aa23.08■■□□□ 1.29
VTI1B-201ENST00000216456 KCNJ18B7U540 433 aa23.08■■□□□ 1.29
VTI1B-201ENST00000216456 CYBBP04839 570 aa23.08■■□□□ 1.29
VTI1B-201ENST00000216456 FYNP06241 537 aa23.08■■□□□ 1.29
VTI1B-201ENST00000216456 HLA-FP30511 346 aa23.08■■□□□ 1.29
VTI1B-201ENST00000216456 SLC6A4P31645 630 aa23.08■■□□□ 1.29
VTI1B-201ENST00000216456 HARS2P49590 506 aaKnown RBP23.08■■□□□ 1.29
VTI1B-201ENST00000216456 ENPP2Q13822 863 aa23.08■■□□□ 1.29
VTI1B-201ENST00000216456 CRACR2AQ9BSW2 395 aa23.08■■□□□ 1.29
VTI1B-201ENST00000216456 FRYQ5TBA9 3013 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 BICDL2A1A5D9 508 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 TOP3BO95985 862 aaKnown RBP23.07■■□□□ 1.28
VTI1B-201ENST00000216456 AFPP02771 609 aaKnown RBP23.07■■□□□ 1.28
VTI1B-201ENST00000216456 KRT5P13647 590 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 PPP1R2P41236 205 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 DAB2IPQ5VWQ8 1189 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 PEAR1Q5VY43 1037 aaPredicted RBP23.07■■□□□ 1.28
VTI1B-201ENST00000216456 SLC36A4Q6YBV0 504 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 SCUBE3Q8IX30 993 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 DEFB124Q8NES8 71 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 ADAM32Q8TC27 787 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 GTPBP2Q9BX10 602 aaKnown RBP23.07■■□□□ 1.28
VTI1B-201ENST00000216456 NUSAP1Q9BXS6 441 aaKnown RBP23.07■■□□□ 1.28
VTI1B-201ENST00000216456 CYTH4Q9UIA0 394 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.07■■□□□ 1.28
VTI1B-201ENST00000216456 CEP192Q8TEP8 1941 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 ADAMTS9Q9P2N4 1935 aa23.07■■□□□ 1.28
VTI1B-201ENST00000216456 P4HA2O15460 535 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 ZBTB24O43167 697 aaPredicted RBP23.06■■□□□ 1.28
VTI1B-201ENST00000216456 ZNF217O75362 1048 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 LTFP02788 710 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 SPINK2P20155 84 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 COPAP53621 1224 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 GCNT1Q02742 428 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 MPPE1Q53F39 396 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 SPDYCQ5MJ68 293 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 NADSYN1Q6IA69 706 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 MSANTD2Q6P1R3 559 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 SLC23A3Q6PIS1 610 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 CREBRFQ8IUR6 639 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 SCML4Q8N228 414 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 TMA16Q96EY4 203 aaKnown RBP23.06■■□□□ 1.28
VTI1B-201ENST00000216456 PRDM16Q9HAZ2 1276 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 UBE2TQ9NPD8 197 aaPredicted RBP23.06■■□□□ 1.28
VTI1B-201ENST00000216456 ABCB8Q9NUT2 735 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 TJP2Q9UDY2 1190 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 STOML2Q9UJZ1 356 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 NAALADL1Q9UQQ1 740 aa23.06■■□□□ 1.28
VTI1B-201ENST00000216456 KRT37O76014 449 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 IGLV3-27P01718 113 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 EPHX1P07099 455 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 NCAM1P13591 858 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 GPD2P43304 727 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 MARSP56192 900 aaKnown RBP23.05■■□□□ 1.28
VTI1B-201ENST00000216456 CETN1Q12798 172 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 STARD3Q14849 445 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 FAM133BQ5BKY9 247 aaKnown RBP23.05■■□□□ 1.28
VTI1B-201ENST00000216456 ADGRF1Q5T601 910 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 FOXR2Q6PJQ5 311 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 TMPRSS6Q8IU80 811 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 TOE1Q96GM8 510 aaKnown RBP23.05■■□□□ 1.28
VTI1B-201ENST00000216456 CAPN10Q9HC96 672 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 ST7Q9NRC1 585 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 ASCC3Q8N3C0 2202 aaKnown RBP23.05■■□□□ 1.28
VTI1B-201ENST00000216456 PI4KAP42356 2102 aa23.05■■□□□ 1.28
VTI1B-201ENST00000216456 SLC9A1P19634 815 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 CD70P32970 193 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 TBX4P57082 545 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 ZNF252P-AS1Q0IIN9 211 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 CHST9Q7L1S5 443 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 ADIPOR2Q86V24 386 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 DQX1Q8TE96 717 aaKnown RBP23.04■■□□□ 1.28
VTI1B-201ENST00000216456 UCMAQ8WVF2 138 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 IRGQQ8WZA9 623 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 ZNF419Q96HQ0 510 aaPredicted RBP23.04■■□□□ 1.28
VTI1B-201ENST00000216456 PRICKLE1Q96MT3 831 aaPredicted RBP23.04■■□□□ 1.28
VTI1B-201ENST00000216456 GPR174Q9BXC1 333 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 SLC2A11Q9BYW1 496 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 MTG2Q9H4K7 406 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 STIM2Q9P246 746 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 USP36Q9P275 1121 aaKnown RBP23.04■■□□□ 1.28
VTI1B-201ENST00000216456 XPO7Q9UIA9 1087 aaKnown RBP23.04■■□□□ 1.28
VTI1B-201ENST00000216456 AJAP1Q9UKB5 411 aaPredicted RBP23.04■■□□□ 1.28
VTI1B-201ENST00000216456 CNTN6Q9UQ52 1028 aa23.04■■□□□ 1.28
VTI1B-201ENST00000216456 MAP1BP46821 2468 aaKnown RBP23.04■■□□□ 1.28
VTI1B-201ENST00000216456 SYNCRIPO60506 623 aaKnown RBP23.03■■□□□ 1.28
VTI1B-201ENST00000216456 TBL1XO60907 577 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 NDUFS2O75306 463 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 LETM1O95202 739 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms