RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 STIP1P31948 543 aaKnown RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CAMK2GQ13555 558 aaPredicted RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 KCNMB4Q86W47 210 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM228AQ86W67 206 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 BBS7Q8IWZ6 715 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 SERAC1Q96JX3 654 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 DGCR6LQ9BY27 220 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 RXFP1Q9HBX9 757 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 MAN1C1Q9NR34 630 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 GEMIN8Q9NWZ8 242 aaKnown RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 AAR2Q9Y312 384 aaKnown RBP13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 TCRBV5S4A2TA0A5A2 114 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CYP2C8P10632 490 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM182AQ5T1J6 154 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 DDHD1Q8NEL9 900 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 TMEM106CQ9BVX2 250 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 C2orf71A6NGG8 1288 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM25AB3EWG3 89 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM25CB3EWG5 89 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM25GB3EWG6 89 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 FOXP2O15409 715 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 SLITRK3O94933 977 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 PCDH8O95206 1070 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 STX5Q13190 355 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 HES2Q9Y543 173 aa13.95□□□□□ -0.18
TGFBR3-201ENST00000212355 PRAMEF19Q5SWL8 479 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 SLC26A11Q86WA9 606 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 PAIP2BQ9ULR5 123 aaKnown RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM50BQ9Y247 325 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 FCHO1O14526 889 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 TPP1O14773 563 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 ATP12AP54707 1039 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 BEX3Q00994 111 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 SPPL2AQ8TCT8 520 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 HDHD2Q9H0R4 259 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 THP07101 528 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 ADRA1DP25100 572 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 UBAP2LQ14157 1087 aaKnown RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 TPGS1Q6ZTW0 290 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 LPCAT2Q7L5N7 544 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 HIC2Q96JB3 615 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 RNF145Q96MT1 663 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 NDNQ99608 321 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 KLHL1Q9NR64 748 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 PXDNLA1KZ92 1463 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 UBDO15205 165 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 INSRRP14616 1297 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 RBL1P28749 1068 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 BCAT1P54687 386 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 GRIK5Q16478 980 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 ZNF470Q6ECI4 717 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 TRMT11Q7Z4G4 463 aaKnown RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 GPR152Q8TDT2 470 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 SYTL5Q8TDW5 730 aaPredicted RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 OXNAD1Q96HP4 312 aaPredicted RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 SEMA4BQ9NPR2 832 aaPredicted RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 ATXN2Q99700 1313 aaKnown RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 ADGRB3O60242 1522 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 H2AFYO75367 372 aaKnown RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 TUBP50607 506 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 PTENP60484 403 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 TP53BP2Q13625 1128 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 Q4G0T1 1027 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 VPS37AQ8NEZ2 397 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 SLC2A14Q8TDB8 520 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 ZNF606Q8WXB4 792 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.94□□□□□ -0.189e-7■■■■■ 54.9
TGFBR3-201ENST00000212355 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 BATF3Q9NR55 127 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 DAPK2Q9UIK4 370 aa13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 TMA7Q9Y2S6 64 aaKnown RBP13.94□□□□□ -0.18
TGFBR3-201ENST00000212355 ZC3H13Q5T200 1668 aaKnown RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM237BA0A1B0GVD1 139 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 CFAP99D6REC4 459 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ALDH5A1P51649 535 aaPredicted RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 BACE1P56817 501 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 MRPS22P82650 360 aaKnown RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 FASTKQ14296 549 aaKnown RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SLC44A4Q53GD3 710 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SYTL1Q8IYJ3 562 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SH3GL1Q99961 368 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 DMAP1Q9NPF5 467 aaPredicted RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 VPS45Q9NRW7 570 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 PROCP04070 461 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 BDNFP23560 247 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 CCR1P32246 355 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 MSX2P35548 267 aaPredicted RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 NT5C2P49902 561 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 LSM3P62310 102 aaKnown RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 FSTL1Q12841 308 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ZIK1Q3SY52 487 aaPredicted RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 UGT3A1Q6NUS8 523 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SNX32Q86XE0 403 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 TNIP2Q8NFZ5 429 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 CDRT15Q96T59 188 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 RSPH9Q9H1X1 276 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms