RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 RAPH1Q70E73 1250 aa15.56■□□□□ 0.08
EFNB1-201ENST00000204961 DEFB106AQ8N104 65 aa15.56■□□□□ 0.08
EFNB1-201ENST00000204961 DNERQ8NFT8 737 aa15.56■□□□□ 0.08
EFNB1-201ENST00000204961 TEKT4Q8WW24 435 aa15.56■□□□□ 0.08
EFNB1-201ENST00000204961 DCPSQ96C86 337 aaKnown RBP15.56■□□□□ 0.08
EFNB1-201ENST00000204961 SMARCAD1Q9H4L7 1026 aa15.56■□□□□ 0.08
EFNB1-201ENST00000204961 RBPJLQ9UBG7 517 aa15.56■□□□□ 0.08
EFNB1-201ENST00000204961 PPM1HQ9ULR3 514 aa15.56■□□□□ 0.08
EFNB1-201ENST00000204961 PCDHGC3Q9UN70 934 aa15.56■□□□□ 0.08
EFNB1-201ENST00000204961 ADCY6O43306 1168 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 RFPL1O75677 317 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 CIB2O75838 187 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 PIGRP01833 764 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 AMHP03971 560 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 P4HA1P13674 534 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 SULT1E1P49888 294 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 HSP90AA5PQ58FG0 334 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 SLC30A9Q6PML9 568 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 TDRPQ86YL5 185 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 RNF34Q969K3 372 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 ZNF669Q96BR6 464 aaPredicted RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 ZFP42Q96MM3 310 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 RHOBTB2Q9BYZ6 727 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 FOXP3Q9BZS1 431 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 WDR55Q9H6Y2 383 aaPredicted RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 DCLRE1BQ9H816 532 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 STOML1Q9UBI4 398 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 PLLPQ9Y342 182 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 ATP5HO75947 161 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 PFKMP08237 780 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 RBP5P82980 135 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 RBBP5Q15291 538 aaKnown RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 LGSNQ5TDP6 509 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 DRICH1Q6PGQ1 229 aaPredicted RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 HFE2Q6ZVN8 426 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 RPS27LQ71UM5 84 aaKnown RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 ADGRF2Q8IZF7 708 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 USP13Q92995 863 aaPredicted RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 XAB2Q9HCS7 855 aaKnown RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 SYBUQ9NX95 663 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 PIN4Q9Y237 131 aaKnown RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 TTC3P53804 2025 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 CCDC160A6NGH7 325 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 DYNC1LI2O43237 492 aaPredicted RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 MFSD11O43934 449 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 B4GALT4O60513 344 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 OPHN1O60890 802 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 ETV4P43268 484 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 IRF9Q00978 393 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 ZNF460Q14592 562 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 GRAMD1BQ3KR37 738 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 CYP4V2Q6ZWL3 525 aaPredicted RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 SCYL1Q96KG9 808 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 KCTD15Q96SI1 283 aaPredicted RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 C2orf40Q9H1Z8 148 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 FZD8Q9H461 694 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 PLAC1Q9HBJ0 212 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 ERAP1Q9NZ08 941 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 TMEM216Q9P0N5 145 aa15.55■□□□□ 0.08
EFNB1-201ENST00000204961 CORO1CQ9ULV4 474 aaPredicted RBP15.55■□□□□ 0.08
EFNB1-201ENST00000204961 HMX2A2RU54 273 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 H3BRB1 525 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 M0QYT0 321 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 TM9SF1O15321 606 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 MAGEB2O15479 319 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 PHGDHO43175 533 aaKnown RBP15.54■□□□□ 0.08
EFNB1-201ENST00000204961 BEST1O76090 585 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 GNAZP19086 355 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 KLC1Q07866 573 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 TTLL4Q14679 1199 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 ARMCX2Q7L311 632 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 DPP9Q86TI2 863 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 RASSF3Q86WH2 238 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 EGFL6Q8IUX8 553 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 SCUBE1Q8IWY4 988 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 ACVR1CQ8NER5 493 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.54■□□□□ 0.08
EFNB1-201ENST00000204961 OMDQ99983 421 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 TUT1Q9H6E5 874 aaKnown RBP15.54■□□□□ 0.08
EFNB1-201ENST00000204961 PAPOLBQ9NRJ5 636 aaKnown RBP15.54■□□□□ 0.08
EFNB1-201ENST00000204961 MTO1Q9Y2Z2 717 aaKnown RBP15.54■□□□□ 0.08
EFNB1-201ENST00000204961 GOLGA4Q13439 2230 aaKnown RBP15.54■□□□□ 0.08
EFNB1-201ENST00000204961 VAV1P15498 845 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 INHBEP58166 350 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 SYPL2Q5VXT5 272 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 PLD6Q8N2A8 252 aaKnown RBP15.54■□□□□ 0.08
EFNB1-201ENST00000204961 MFSD3Q96ES6 412 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 MCRS1Q96EZ8 462 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 FAM167AQ96KS9 214 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 GPRC5DQ9NZD1 345 aa15.54■□□□□ 0.08
EFNB1-201ENST00000204961 MYOCOSA0A1B0GUC4 107 aa15.53■□□□□ 0.08
EFNB1-201ENST00000204961 MEIS3P2A8K0S8 358 aa15.53■□□□□ 0.08
EFNB1-201ENST00000204961 RNF103O00237 685 aa15.53■□□□□ 0.08
EFNB1-201ENST00000204961 MAP3K7O43318 606 aa15.53■□□□□ 0.08
EFNB1-201ENST00000204961 LUC7L3O95232 432 aaKnown RBP15.53■□□□□ 0.08
EFNB1-201ENST00000204961 ARL4AP40617 200 aa15.53■□□□□ 0.08
EFNB1-201ENST00000204961 ATG14Q6ZNE5 492 aa15.53■□□□□ 0.08
EFNB1-201ENST00000204961 PHTF2Q8N3S3 785 aa15.53■□□□□ 0.08
EFNB1-201ENST00000204961 PHACTR1Q9C0D0 580 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms