RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 WDCPQ9H6R7 721 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 CDY1Q9Y6F8 540 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 KCNN4O15554 427 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 EFCAB14O75071 495 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 HCAR3P49019 387 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 GABPB1Q06547 395 aaPredicted RBP16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 SLC29A2Q14542 456 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 PAFAH1B3Q15102 231 aaKnown RBP16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 MFSD5Q6N075 450 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 MSANTD2Q6P1R3 559 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 KCNT2Q6UVM3 1135 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 MON1AQ86VX9 555 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 PPIL6Q8IXY8 311 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 NAT8LQ8N9F0 302 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 FBXO22Q8NEZ5 403 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 CASP10Q92851 521 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 PKNOX2Q96KN3 472 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 SPATA17Q96L03 361 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 PHACTR1Q9C0D0 580 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 TMBIM4Q9HC24 238 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 DNAJC17Q9NVM6 304 aaKnown RBP16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 OSER1Q9NX31 292 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 ARHGEF38Q9NXL2 777 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 BACE2Q9Y5Z0 518 aa16.15■□□□□ 0.18
LAPTM4A-201ENST00000175091 WDR27A2RRH5 827 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 GOLGA6CA6NDK9 693 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 GOLGA6L10A6NI86 522 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 SOAT2O75908 522 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 SHBGP04278 402 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 MYZAPP0CAP1 466 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 GOLGA6DP0CG33 693 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 HAPLN1P10915 354 aaPredicted RBP16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 RAG1P15918 1043 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 CAPN2P17655 700 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 TPI1P60174 286 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 PSMD5Q16401 504 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 BRMS1LQ5PSV4 323 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 BZW1Q7L1Q6 419 aaKnown RBP16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 TMCO2Q7Z6W1 182 aaPredicted RBP16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 ARHGAP18Q8N392 663 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 RBM15Q96T37 977 aaKnown RBP eCLIP16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 SEPT5Q99719 369 aaPredicted RBP16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 GOLGA6AQ9NYA3 693 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 PAK5Q9P286 719 aa16.14■□□□□ 0.17
LAPTM4A-201ENST00000175091 HACD1B0YJ81 288 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 SMAPO00193 183 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 ADAM12O43184 909 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 TMEM63AO94886 807 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 RTN3O95197 1032 aaPredicted RBP16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 TTC4O95801 387 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 GYS2P54840 703 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 IFFO1Q0D2I5 559 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 MGAT5BQ3V5L5 792 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 ANKRD22Q5VYY1 191 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 CMTR2Q8IYT2 770 aaKnown RBP16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 SLC39A11Q8N1S5 342 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 ATP6V1G3Q96LB4 118 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 ZNF558Q96NG5 402 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 SERPINB11Q96P15 392 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 EPAS1Q99814 870 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 LRRC4CQ9HCJ2 640 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 NINJ2Q9NZG7 142 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 GMIPQ9P107 970 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 NEU3Q9UQ49 428 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 SLC27A5Q9Y2P5 690 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 MSI1O43347 362 aaKnown RBP16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 BAIAP3O94812 1187 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 SOD2P04179 222 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 ERCC2P18074 760 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 ATF6P18850 670 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 PPP2R5DQ14738 602 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 TMEM199Q8N511 208 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 GPR152Q8TDT2 470 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 OSBPL2Q9H1P3 480 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 COMMD8Q9NX08 183 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 SFMBT1Q9UHJ3 866 aa16.13■□□□□ 0.17
LAPTM4A-201ENST00000175091 HMGB1P1B2RPK0 211 aaPredicted RBP16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 LRIG2O94898 1065 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 ACSL3O95573 720 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 VAV1P15498 845 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 YWHAQP27348 245 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 CCR1P32246 355 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 ACTN2P35609 894 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 BASP1P80723 227 aaKnown RBP16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 DUSP4Q13115 394 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 KCNJ11Q14654 390 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 PRKD1Q15139 912 aaPredicted RBP16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 KRT71Q3SY84 523 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 HEATR6Q6AI08 1181 aaKnown RBP16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 FAM117BQ6P1L5 589 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 LRRN4Q8WUT4 740 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 TFB1MQ8WVM0 346 aaKnown RBP16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 RNF34Q969K3 372 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 FBXO32Q969P5 355 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 TMEM109Q9BVC6 243 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 HERC2P3Q9BVR0 1158 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 TMEM106CQ9BVX2 250 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 TMEM51Q9NW97 253 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 CLIC5Q9NZA1 410 aa16.12■□□□□ 0.17
LAPTM4A-201ENST00000175091 OR12D3Q9UGF7 316 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms