RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 CASP12Q6UXS9 341 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RHOT1Q8IXI2 618 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 FERD3LQ96RJ6 166 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SLC39A8Q9C0K1 460 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 DRG1Q9Y295 367 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 ANKRD6Q9Y2G4 727 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 TBC1D30Q9Y2I9 924 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ARL5CA6NH57 179 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 KATNA1O75449 491 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SASH1O94885 1247 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 CCNYL3P0C7X3 344 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 C1orf146Q5VVC0 180 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ETNPPLQ8TBG4 499 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 BLOC1S5Q8TDH9 187 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 TBCKQ8TEA7 893 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 THAP11Q96EK4 314 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 GTPBP2Q9BX10 602 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 UNKQ9C0B0 810 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 ZFP69BQ9UJL9 534 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 POLR1AO95602 1720 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 MYBP10242 640 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PDGFRAP16234 1089 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 FBLN1P23142 703 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 BLKP51451 505 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 DUSP3P51452 185 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 LGALS3BPQ08380 585 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PRR5LQ6MZQ0 368 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 LLGL2Q6P1M3 1020 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 FRS2Q8WU20 508 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MROH8Q9H579 483 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ZNF510Q9Y2H8 683 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PCDHB5Q9Y5E4 795 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PPP1R3GB7ZBB8 358 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ADH1AP07327 375 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MYL12AP19105 171 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ARFIP2P53365 341 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 POLE2P56282 527 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 TSNQ15631 228 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 EFCAB12Q6NXP0 572 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 DOK6Q6PKX4 331 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PAGE2Q7Z2X7 111 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SMYD1Q8NB12 490 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SETD7Q8WTS6 366 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 PIGBQ92521 554 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 IRF2BPLQ9H1B7 796 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RPA3P35244 121 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 LHX1P48742 406 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SP2Q02086 613 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MRPL49Q13405 166 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 MAD2L1BPQ15013 274 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 PTPN21Q16825 1174 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SERPINA13PQ6UXR4 307 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RNF149Q8NC42 400 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PRICKLE1Q96MT3 831 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 TASP1Q9H6P5 420 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 UBA2Q9UBT2 640 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 TMEM5Q9Y2B1 443 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 IL6P05231 212 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ANPEPP15144 967 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 CASP9P55211 416 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 CYLC2Q14093 348 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 FAM187BQ17R55 369 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 BICRALQ6AI39 1079 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RASAL3Q86YV0 1011 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RNF26Q9BY78 433 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 OSBPL5Q9H0X9 879 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 ZMYM6O95789 1325 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 A0A0G2JMP0 313 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RPL3P39023 403 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 CACNA2D1P54289 1103 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 BTN3A2P78410 334 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SNTA1Q13424 505 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RASGRP3Q8IV61 690 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 OR4M2Q8NGB6 313 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 GATAD2BQ8WXI9 593 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 VTA1Q9NP79 307 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 GSAPA4D1B5 854 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 O00370 1275 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 AKR1A1P14550 325 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 C1QBPQ07021 282 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 SP8Q8IXZ3 490 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 OR8D1Q8WZ84 308 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 TMEM125Q96AQ2 219 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MEIS3Q99687 375 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 COPS7AQ9UBW8 275 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ZNF780BQ9Y6R6 833 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SLC12A8A0AV02 714 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 XPO1O14980 1071 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 RGS10O43665 173 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 POLBP06746 335 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 TPP2P29144 1249 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 RBMS1P29558 406 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 HMGCS2P54868 508 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MZT2AQ6P582 158 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 KCTD8Q6ZWB6 473 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ULK2Q8IYT8 1036 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MICU2Q8IYU8 434 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SETD6Q8TBK2 473 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ACOT12Q8WYK0 555 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms