RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 GRAMD1AQ96CP6 724 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 RBM15Q96T37 977 aaKnown RBP eCLIP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 SNX25Q9H3E2 840 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 GIT1Q9Y2X7 761 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 AMHP03971 560 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 CCNB1P14635 433 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 PTPN1P18031 435 aaKnown RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 GNAZP19086 355 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 BCAT1P54687 386 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 KPNB1Q14974 876 aaKnown RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 MDH1BQ5I0G3 518 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 NLRP9Q7RTR0 991 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 RNF180Q86T96 592 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 ZMIZ2Q8NF64 920 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 KCNK16Q96T55 309 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 HNRNPABQ99729 332 aaKnown RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 LRMDAQ9H2I8 198 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 DDX56Q9NY93 547 aaKnown RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 LRRC42Q9Y546 428 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 DPYSL4O14531 572 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 RPA3P35244 121 aaPredicted RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 ROR2Q01974 943 aaKnown RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 DPYSL3Q14195 570 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 TCTN1Q2MV58 587 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 NPNTQ6UXI9 565 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 DSTYKQ6XUX3 929 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 PIGZQ86VD9 579 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 CCNJLQ8IV13 435 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 FAM172AQ8WUF8 416 aa11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 DDX43Q9NXZ2 648 aaKnown RBP11.69□□□□□ -0.54
GPATCH1-201ENST00000170564 SCN5AQ14524 2016 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 XPOTO43592 962 aaKnown RBP11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 CST8O60676 142 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 YY1P25490 414 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 VHLP40337 213 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 BRCC3P46736 316 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 DRICH1Q6PGQ1 229 aaPredicted RBP11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 ANKMY2Q8IV38 441 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 MFN1Q8IWA4 741 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 ALLCQ8N6M5 410 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 ACTL9Q8TC94 416 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 CENPIQ92674 756 aaPredicted RBP11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 PCED1BQ96HM7 432 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 TMEM209Q96SK2 561 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 RSAD1Q9HA92 442 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 TMPRSS4Q9NRS4 437 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 CHD7Q9P2D1 2997 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 TJP3O95049 919 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 SETSIPP0DME0 302 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 MAGEA4P43358 317 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 LVRNQ6Q4G3 990 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 HFE2Q6ZVN8 426 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 SLC26A9Q7LBE3 791 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 B4GALNT2Q8NHY0 566 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 SH3TC2Q8TF17 1288 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 DUSP16Q9BY84 665 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 DCLRE1BQ9H816 532 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 TMLHEQ9NVH6 421 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 MTMR10Q9NXD2 777 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 WHRNQ9P202 907 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 HESX1Q9UBX0 185 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 FYNP06241 537 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 KRT7P08729 469 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 TROVE2P10155 538 aaKnown RBP eCLIP11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 OTUD4Q01804 1114 aaKnown RBP11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 GAD2Q05329 585 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 ADIGQ0VDE8 80 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 ACAP1Q15027 740 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 P3H1Q32P28 736 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 CLLU1OSQ5K130 101 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 BBS12Q6ZW61 710 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 BHLHA9Q7RTU4 235 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 ZNF280BQ86YH2 543 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 LRRN4Q8WUT4 740 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 NKD2Q969F2 451 aaPredicted RBP11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 SMOQ99835 787 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 ZNF148Q9UQR1 794 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 PTCH2Q9Y6C5 1203 aa11.68□□□□□ -0.54
GPATCH1-201ENST00000170564 VWA8A3KMH1 1905 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 PATJQ8NI35 1801 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 TTC3P53804 2025 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 I6L893 689 aaPredicted RBP11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 NRP1O14786 923 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 WFS1O76024 890 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 VCPP55072 806 aaKnown RBP11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 CUL3Q13618 768 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 PARP6Q2NL67 630 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 BNIPLQ7Z465 357 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 PQLC3Q8N755 202 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 KCTD6Q8NC69 237 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 PKMYT1Q99640 499 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 SLC38A7Q9NVC3 462 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 ASNSD1Q9NWL6 643 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 hCG_2014768A0A024R1R8 64 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 A0A1W2PPM1 405 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 HHLA1C9JL84 531 aa11.67□□□□□ -0.54
GPATCH1-201ENST00000170564 XPO1O14980 1071 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms