RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CYLDQ9NQC7 956 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 NMRK1Q9NWW6 199 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 MTMR10Q9NXD2 777 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 MORF4L1Q9UBU8 362 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 HUS1O60921 280 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 STAU1O95793 577 aaKnown RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 F7P08709 466 aaPredicted RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 CTSHP09668 335 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 DESP17661 470 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 SULT1E1P49888 294 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 OLIG2Q13516 323 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 MROH9Q5TGP6 573 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 SYPL2Q5VXT5 272 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 WSCD1Q658N2 575 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 SLC9A4Q6AI14 798 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 CCNYQ8ND76 341 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 ZNF483Q8TF39 744 aaPredicted RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 MED10Q9BTT4 135 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 DHRS4Q9BTZ2 278 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 PIDD1Q9HB75 910 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 CNTN3Q9P232 1028 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 CORO1CQ9ULV4 474 aaPredicted RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 LRRC42Q9Y546 428 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 IPPQ9Y573 584 aa13.57□□□□□ -0.24
CTNS-201ENST00000046640 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.57□□□□□ -0.24
CTNS-201ENST00000046640 PIRO00625 290 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 NVLO15381 856 aaKnown RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 GSC2O15499 205 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 F2P00734 622 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 ENO1P06733 434 aaKnown RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 BCAT1P54687 386 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 LILRA4P59901 499 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 AP1B1Q10567 949 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 TSNAXIP1Q2TAA8 658 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 SNX30Q5VWJ9 437 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 HFE2Q6ZVN8 426 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 ZNF467Q7Z7K2 595 aaPredicted RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 NME8Q8N427 588 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 LRRC52Q8N7C0 313 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 FBXO27Q8NI29 283 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 LPPQ93052 612 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 NSL1Q96IY1 281 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 CLPTM1LQ96KA5 538 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 PARK7Q99497 189 aaKnown RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 BTBD10Q9BSF8 475 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 PLAC1Q9HBJ0 212 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 NDC80O14777 642 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 CHADO15335 359 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 SMIM24O75264 130 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 TGM2P21980 687 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 TAF6P49848 677 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 MAP3K7CLP57077 242 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 KDSRQ06136 332 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 BIRC2Q13490 618 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 THOC5Q13769 683 aaKnown RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 PAN2Q504Q3 1202 aaKnown RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 ANKRD23Q86SG2 305 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 GTF3C2Q8WUA4 911 aaPredicted RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 NRG4Q8WWG1 115 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 SLC44A1Q8WWI5 657 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 SCG3Q8WXD2 468 aaKnown RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 IQCGQ9H095 443 aaKnown RBP13.56□□□□□ -0.24
CTNS-201ENST00000046640 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.56□□□□□ -0.24
CTNS-201ENST00000046640 DTLQ9NZJ0 730 aa13.56□□□□□ -0.24
CTNS-201ENST00000046640 IQANK1A0A1B0GTG1 560 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 E2F8A0AVK6 867 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 DPYSL4O14531 572 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 CYB561D2O14569 222 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 KIF3CO14782 793 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 CCDC22O60826 627 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 ATP6V1C1P21283 382 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 CALRP27797 417 aaKnown RBP13.55□□□□□ -0.24
CTNS-201ENST00000046640 PSEN2P49810 448 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 SESN2P58004 480 aaPredicted RBP13.55□□□□□ -0.24
CTNS-201ENST00000046640 FAM110CQ1W6H9 321 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 SPRYD7Q5W111 196 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
CTNS-201ENST00000046640 CES3Q6UWW8 571 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 UNC5AQ6ZN44 842 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 ZNF276Q8N554 614 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 RNF169Q8NCN4 708 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 FAM161BQ96MY7 647 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 KCNK16Q96T55 309 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 ZNF670Q9BS34 389 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 DCLRE1BQ9H816 532 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 POPDC2Q9HBU9 364 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.55□□□□□ -0.24
CTNS-201ENST00000046640 GNEQ9Y223 722 aaKnown RBP13.55□□□□□ -0.24
CTNS-201ENST00000046640 TTLL3Q9Y4R7 772 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 WASF2Q9Y6W5 498 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 IQCA1LA6NCM1 817 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 SLC15A5A6NIM6 579 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 H3BRJ5 948 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 MDM4O15151 490 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 CSH1P0DML2 217 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms