RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TMEM215Q68D42 235 aa16.59■□□□□ 0.25
ERCC1-201ENST00000013807 MSANTD2Q6P1R3 559 aa16.59■□□□□ 0.25
ERCC1-201ENST00000013807 TRIML1Q8N9V2 468 aa16.59■□□□□ 0.25
ERCC1-201ENST00000013807 CADM4Q8NFZ8 388 aa16.59■□□□□ 0.25
ERCC1-201ENST00000013807 IRGQQ8WZA9 623 aa16.59■□□□□ 0.25
ERCC1-201ENST00000013807 MKRN2Q9H000 416 aaKnown RBP16.59■□□□□ 0.25
ERCC1-201ENST00000013807 PRDM16Q9HAZ2 1276 aa16.59■□□□□ 0.25
ERCC1-201ENST00000013807 DNAAF2Q9NVR5 837 aaKnown RBP16.59■□□□□ 0.25
ERCC1-201ENST00000013807 CYP8B1Q9UNU6 501 aa16.59■□□□□ 0.25
ERCC1-201ENST00000013807 ASPMQ8IZT6 3477 aa16.59■□□□□ 0.25
ERCC1-201ENST00000013807 GJB3O75712 270 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 IGLV3-27P01718 113 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 HMBSP08397 361 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 NCAM1P13591 858 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 HOXD9P28356 352 aaPredicted RBP16.58■□□□□ 0.24
ERCC1-201ENST00000013807 CD6P30203 668 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 DAOAP59103 153 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 ADIGQ0VDE8 80 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 SLC14A1Q13336 389 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 STIM1Q13586 685 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 ZNF234Q14588 700 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 MPP7Q5T2T1 576 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 FMNL3Q8IVF7 1028 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.58■□□□□ 0.24
ERCC1-201ENST00000013807 DDI1Q8WTU0 396 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 TFAP2BQ92481 460 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 NDRG1Q92597 394 aaKnown RBP16.58■□□□□ 0.24
ERCC1-201ENST00000013807 AZIN2Q96A70 460 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 HSPA12BQ96MM6 686 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 IPO9Q96P70 1041 aaKnown RBP16.58■□□□□ 0.24
ERCC1-201ENST00000013807 ZSWIM1Q9BR11 485 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 SLC32A1Q9H598 525 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 CD93Q9NPY3 652 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 SUSD2Q9UGT4 822 aa16.58■□□□□ 0.24
ERCC1-201ENST00000013807 ATXN2Q99700 1313 aaKnown RBP16.58■□□□□ 0.24
ERCC1-201ENST00000013807 FAM208BQ5VWN6 2430 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 CFIP05156 583 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 PROS1P07225 676 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 SYPP08247 313 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 CD19P15391 556 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 CD44P16070 742 aaKnown RBP16.57■□□□□ 0.24
ERCC1-201ENST00000013807 OXTRP30559 389 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 RPL34P49207 117 aaKnown RBP16.57■□□□□ 0.24
ERCC1-201ENST00000013807 COPAP53621 1224 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 UAP1L1Q3KQV9 507 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 SYCP2LQ5T4T6 812 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 TTI2Q6NXR4 508 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 PMF1Q6P1K2 205 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 TMPRSS6Q8IU80 811 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 SIX6OS1Q8N1H7 587 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 DEFB119Q8N690 84 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 UBA3Q8TBC4 463 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 RNF139Q8WU17 664 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
ERCC1-201ENST00000013807 HSFY1Q96LI6 401 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 TMEM121BQ9BXQ6 578 aaPredicted RBP16.57■□□□□ 0.24
ERCC1-201ENST00000013807 SLC6A17Q9H1V8 727 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 TMEM245Q9H330 911 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.24
ERCC1-201ENST00000013807 CNTN6Q9UQ52 1028 aa16.57■□□□□ 0.24
ERCC1-201ENST00000013807 PPP1R3GB7ZBB8 358 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 RNF225M0QZC1 329 aaPredicted RBP16.56■□□□□ 0.24
ERCC1-201ENST00000013807 SYNCRIPO60506 623 aaKnown RBP16.56■□□□□ 0.24
ERCC1-201ENST00000013807 OPHN1O60890 802 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 NDUFS2O75306 463 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 BMP6P22004 513 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 HLA-FP30511 346 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 MAPK8P45983 427 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 TPMTP51580 245 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 MARSP56192 900 aaKnown RBP16.56■□□□□ 0.24
ERCC1-201ENST00000013807 GCNT1Q02742 428 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 RING1Q06587 406 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 CAMK2GQ13555 558 aaPredicted RBP16.56■□□□□ 0.24
ERCC1-201ENST00000013807 HNRNPDQ14103 355 aaKnown RBP16.56■□□□□ 0.24
ERCC1-201ENST00000013807 WDR45BQ5MNZ6 344 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 TMEM270Q6UE05 265 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 MINDY1Q8N5J2 469 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 KDF1Q8NAX2 398 aaPredicted RBP16.56■□□□□ 0.24
ERCC1-201ENST00000013807 DEFB124Q8NES8 71 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 WFIKKN2Q8TEU8 576 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 TMA16Q96EY4 203 aaKnown RBP16.56■□□□□ 0.24
ERCC1-201ENST00000013807 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 ZDHHC5Q9C0B5 715 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 PCED1AQ9H1Q7 454 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 SFMBT1Q9UHJ3 866 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 DMXL2Q8TDJ6 3036 aa16.56■□□□□ 0.24
ERCC1-201ENST00000013807 FAM221BA6H8Z2 402 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 METTL12A8MUP2 240 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 KCNJ18B7U540 433 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 IRAK2O43187 625 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 CD59P13987 128 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 GNSP15586 552 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 ATXN3P54252 364 aaPredicted RBP16.55■□□□□ 0.24
ERCC1-201ENST00000013807 CETN1Q12798 172 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 BECN1Q14457 450 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 KIAA1324Q6UXG2 1013 aaKnown RBP16.55■□□□□ 0.24
ERCC1-201ENST00000013807 BEND5Q7L4P6 421 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 ADIPOR2Q86V24 386 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 TRIM59Q8IWR1 403 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 UNC45BQ8IWX7 931 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms