RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 CPA6Q8N4T0 437 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 FAM172AQ8WUF8 416 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 MYEOVQ96EZ4 313 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 FBRSL1Q9HCM7 1045 aaKnown RBP12.51□□□□□ -0.41
SYPL1-201ENST00000011473 C11orf16Q9NQ32 467 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 TRPV5Q9NQA5 729 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 SPHK2Q9NRA0 654 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 MTF2Q9Y483 593 aaPredicted RBP12.51□□□□□ -0.41
SYPL1-201ENST00000011473 TMEM221A6NGB7 291 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 M0R296 226 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 TRIM24O15164 1050 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 CCP110O43303 1012 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 APOEP02649 317 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 GBP1P32455 592 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 ZNF252P-AS1Q0IIN9 211 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 NNTQ13423 1086 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 FAM133BQ5BKY9 247 aaKnown RBP12.5□□□□□ -0.41
SYPL1-201ENST00000011473 RAD9BQ6WBX8 426 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 ARCQ7LC44 396 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 UNC45BQ8IWX7 931 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 BBS2Q9BXC9 721 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 DCLK3Q9C098 648 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 TKTL2Q9H0I9 626 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 MFSD1Q9H3U5 465 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 NDRG2Q9UN36 371 aaKnown RBP12.5□□□□□ -0.41
SYPL1-201ENST00000011473 SNX10Q9Y5X0 201 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 CUL9Q8IWT3 2517 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 TICRRQ7Z2Z1 1910 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 ANKRD62A6NC57 917 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 KCNU1A8MYU2 1149 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 ACSL4O60488 711 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 ADH5P11766 374 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 RDXP35241 583 aaKnown RBP12.5□□□□□ -0.41
SYPL1-201ENST00000011473 SLC6A11P48066 632 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 SLC11A2P49281 568 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 ZNF143P52747 638 aaPredicted RBP12.5□□□□□ -0.41
SYPL1-201ENST00000011473 HDAC4P56524 1084 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 PON2Q15165 354 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 RAP1GAP2Q684P5 730 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 BNIPLQ7Z465 357 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 TMEM139Q8IV31 216 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 OTUB2Q96DC9 234 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 TRIM11Q96F44 468 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 PGAP3Q96FM1 320 aaPredicted RBP12.5□□□□□ -0.41
SYPL1-201ENST00000011473 BAG1Q99933 345 aaPredicted RBP12.5□□□□□ -0.41
SYPL1-201ENST00000011473 MAGEB5Q9BZ81 275 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 WDCPQ9H6R7 721 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 TBC1D17Q9HA65 648 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.5□□□□□ -0.41
SYPL1-201ENST00000011473 RRN3Q9NYV6 651 aa12.5□□□□□ -0.41
SYPL1-201ENST00000011473 ANTXRLA6NF34 631 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 TMEM191CA6NGB0 347 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 ADH1CP00326 375 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 MYBL1P10243 752 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 TYRP14679 529 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 CXCR3P49682 368 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 MRE11P49959 708 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 GSE1Q14687 1217 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 UBXN2BQ14CS0 331 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 ADGRF1Q5T601 910 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 PIK3R6Q5UE93 754 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 SFTPA1Q8IWL2 248 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 CFAP52Q8N1V2 620 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 CTNNBL1Q8WYA6 563 aaPredicted RBP12.49□□□□□ -0.41
SYPL1-201ENST00000011473 FAM3CQ92520 227 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 BTN2A3PQ96KV6 586 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 PRICKLE1Q96MT3 831 aaPredicted RBP12.49□□□□□ -0.41
SYPL1-201ENST00000011473 NUP85Q9BW27 656 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 OSGEPQ9NPF4 335 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 CLEC4EQ9ULY5 219 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 ZNF510Q9Y2H8 683 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 SCINQ9Y6U3 715 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 TECTAO75443 2155 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 COL4A2P08572 1712 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 PI15O43692 258 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 CYP1A2P05177 515 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 H2AFZP0C0S5 128 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 FECHP22830 423 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 PSMA2P25787 234 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 CHKAP35790 457 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 PTPN9P43378 593 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 NR1H3Q13133 447 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 MS4A13Q5J8X5 152 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 FYB2Q5VWT5 728 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 CWF19L1Q69YN2 538 aaKnown RBP12.49□□□□□ -0.41
SYPL1-201ENST00000011473 SCYL2Q6P3W7 929 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 H2AFVQ71UI9 128 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 SND1Q7KZF4 910 aaKnown RBP eCLIP12.49□□□□□ -0.414e-12■■■■■ 32.5
SYPL1-201ENST00000011473 CCDC185Q8N715 623 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 DDI1Q8WTU0 396 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 PBXIP1Q96AQ6 731 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 MRPL47Q9HD33 250 aaKnown RBP12.49□□□□□ -0.41
SYPL1-201ENST00000011473 ANAPC7Q9UJX3 599 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 STOML2Q9UJZ1 356 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 HS3ST4Q9Y661 456 aa12.49□□□□□ -0.41
SYPL1-201ENST00000011473 KIF26AQ9ULI4 1882 aaPredicted RBP12.48□□□□□ -0.41
SYPL1-201ENST00000011473 PAGE1O75459 146 aa12.48□□□□□ -0.41
SYPL1-201ENST00000011473 F9P00740 461 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms