RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 KLHL4Q9C0H6 718 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 C1orf21Q9H246 121 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 VCX3BQ9H321 246 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 RPF1Q9H9Y2 349 aaKnown RBP10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 VCX3AQ9NNX9 186 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 MYOZ2Q9NPC6 264 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 DMAP1Q9NPF5 467 aaPredicted RBP10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 DNAJB4Q9UDY4 337 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 SIX4Q9UIU6 781 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 WDR27A2RRH5 827 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 FAM159BA6NKW6 160 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 C2CD4BA6NLJ0 364 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 CSDE1O75534 798 aaKnown RBP10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 ENDOD1O94919 500 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 KLHL2O95198 593 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 DLG1Q12959 904 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 ACAP1Q15027 740 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 ATF7IP2Q5U623 682 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 ACAD11Q709F0 780 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 GET4Q7L5D6 327 aaPredicted RBP10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 ARCQ7LC44 396 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 HPS6Q86YV9 775 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 PCDH18Q9HCL0 1135 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 TPP1O14773 563 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 RAG1P15918 1043 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 FUT4P22083 530 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 UBA1P22314 1058 aaKnown RBP10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 SERPINB9P50453 376 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 SESN2P58004 480 aaPredicted RBP10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 DEUP1Q05D60 604 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 CCNIQ14094 377 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 PDPK2PQ6A1A2 396 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 AAGABQ6PD74 315 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 MPZL3Q6UWV2 235 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 NIM1KQ8IY84 436 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 C1orf127Q8N9H9 656 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 NETO2Q8NC67 525 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 REPS2Q8NFH8 660 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 C17orf50Q8WW18 174 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 TEPSINQ96N21 525 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 PPP1R16BQ96T49 567 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 SNRNP25Q9BV90 132 aaKnown RBP10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 TEX13BQ9BXU2 312 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 MAGEB5Q9BZ81 275 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 IL1RAPL1Q9NZN1 696 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 BTBD7Q9P203 1132 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 AFG3L2Q9Y4W6 797 aa10.84□□□□□ -0.67
CX3CL1-201ENST00000006053 MAFO75444 373 aaPredicted RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 FAM200BP0CF97 657 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 FGF3P11487 239 aaPredicted RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 UQCRBP14927 111 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 TCF7P36402 384 aaPredicted RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 GBE1Q04446 702 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 CXCL9Q07325 125 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 MSLNQ13421 630 aaPredicted RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 TUBB3Q13509 450 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 MBLAC2Q68D91 279 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 ZNF534Q76KX8 674 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 TMEM110Q86TL2 294 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 C10orf107Q8IVU9 208 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 RAB3IL1Q8TBN0 382 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 AGR3Q8TD06 166 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 TRAPPC12Q8WVT3 735 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 CLMNQ96JQ2 1002 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 OLFM3Q96PB7 478 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 MKS1Q9NXB0 559 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 CDH22Q9UJ99 828 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 PCDHA11Q9Y5I1 949 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 A6NJR5 290 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 PGM3O95394 542 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 VCLP18206 1134 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 NAT1P18440 290 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 TGM2P21980 687 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 GABRB2P47870 512 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 TARBP2Q15633 366 aaKnown RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 CCDC14Q49A88 953 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 PPM1JQ5JR12 505 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 NBPF12Q5TAG4 269 aaPredicted RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 SESTD1Q86VW0 696 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 C12orf29Q8N999 325 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 ATP2A3Q93084 1043 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 LRRC39Q96DD0 335 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 ATXN7L3BQ96GX2 97 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 MAN1C1Q9NR34 630 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 TSPAN16Q9UKR8 245 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 EMCNQ9ULC0 261 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 DCXO43602 365 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 CILPO75339 1184 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 IDH3AP50213 366 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 ITGA9Q13797 1035 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 PDE1CQ14123 709 aaPredicted RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 PDK2Q15119 407 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 BOLA3Q53S33 107 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 FAM160B1Q5W0V3 765 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 MAP1SQ66K74 1059 aaPredicted RBP10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 MAVSQ7Z434 540 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 SATL1Q86VE3 508 aa10.83□□□□□ -0.68
CX3CL1-201ENST00000006053 APBB2Q92870 758 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms