RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Vcam1P29533 739 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Sox6P40645 827 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Rmnd5aQ80YQ8 391 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Eva1bQ8K2Y3 164 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Klhl36Q8R124 613 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Krt6bQ9Z331 562 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Cntnap5cQ0V8T7 1305 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Sall1Q9ER74 1322 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Pnldc1B2RXZ1 531 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Wdr72D3YYM4 1114 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Vmn2r63E9Q0K5 859 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Gm9268E9Q0M3 861 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Vmn2r62K7N712 859 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Tal1P22091 329 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 PrkcdP28867 674 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Zc3h15Q3TIV5 426 aaKnown RBP16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 PnocQ64387 187 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Magee1Q6PCZ4 918 aaKnown RBP16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Olfr389Q7TRX7 312 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Gramd1aQ8VEF1 722 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Vps11Q91W86 941 aaKnown RBP16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Pcdhgb5Q91XX5 926 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Rev1Q920Q2 1249 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Lrrc17Q9CXD9 443 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Zfp780bE9Q2S6 806 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 R3hdm1E9Q9Q2 1135 aaKnown RBP16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Tekt5G5E8A8 557 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Sptlc1O35704 473 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Rbp1Q00915 135 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Zfp607aQ3TQG9 686 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Chtf18Q8BIW9 969 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 AgpsQ8C0I1 645 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 PygbQ8CI94 843 aaKnown RBP16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Tmem82Q8R115 356 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 NlnQ91YP2 704 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Ppp1r3aQ99MR9 1089 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Mtmr9Q9Z2D0 545 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 TpteG5E8H5 664 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Sat1P48026 171 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Adcy6Q01341 1165 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Gpd1lQ3ULJ0 351 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Klrg2Q3UM83 387 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Rcsd1Q3UZA1 412 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Rad9bQ6WBX7 403 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Pgs1Q8BHF7 553 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 TbcelQ8C5W3 424 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Olfr615Q8VGY4 313 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Ndufs1Q91VD9 727 aaKnown RBP16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Rxfp2Q91ZZ5 737 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Ap4s1Q9WVL1 144 aa16.18■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Krt6aP50446 553 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Mapk1P63085 358 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Nr1h4Q60641 488 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 StilQ60988 1262 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Nqo1Q64669 274 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Man1c1Q6NXK9 625 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Tmem169Q8BG50 297 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 H2afy2Q8CCK0 372 aaKnown RBP16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 4932414N04RikQ8CEQ9 752 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 PtgisO35074 501 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Arl14Q3SXC5 192 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 FaxcQ3UMF9 409 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Atp13a4Q5XF90 1193 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Disc1Q811T9 852 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Bclaf1Q8K019 919 aaKnown RBP16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Dpp3Q99KK7 738 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Habp4Q9JKS5 411 aaKnown RBP16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Scgb2b19J3QM75 112 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Gm3755K7N743 167 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 CartptP56388 129 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Ggnbp1Q6K1E7 370 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Mib1Q80SY4 1006 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Colgalt1Q8K297 617 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Mov10l1Q99MV5 1187 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Serbp1Q9CY58 407 aaKnown RBP16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Lypla2Q9WTL7 231 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Ric1Q69ZJ7 1422 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Mfsd4b4J3QNS5 503 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Arhgap45Q3TBD2 1116 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Q80WR5 230 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Usp1Q8BJQ2 784 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Castor2Q8CAB8 329 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Vmn1r218Q8R261 298 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 MceeQ9D1I5 178 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Gm8011K7N6Y5 207 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Man1a1P45700 655 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Serpina3mQ03734 418 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Spout1Q3UHX9 385 aaKnown RBP16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Ccdc63Q8CDV6 558 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 MutyhQ99P21 515 aa16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Mettl16Q9CQG2 553 aaKnown RBP16.17■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Tmprss15P97435 1069 aa16.16■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Itga4Q00651 1039 aa16.16■□□□□ 0.18
Clcn3-203ENSMUST00000093490 CamkvQ3UHL1 512 aa16.16■□□□□ 0.18
Clcn3-203ENSMUST00000093490 SyncripQ7TMK9 623 aaKnown RBP16.16■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Plekha8Q80W71 519 aa16.16■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Sugp1Q8CH02 643 aaKnown RBP16.16■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Alg9Q8VDI9 611 aa16.16■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Vps28Q9D1C8 221 aa16.16■□□□□ 0.18
Clcn3-203ENSMUST00000093490 Duoxa2Q9D311 320 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms