RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Atp8b4A2ANX3 1194 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 2610001J05RikF2Z3Y9 59 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zfp105G3X9I0 524 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr1154L7MU57 310 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr117L7N1Z1 317 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 GclmO09172 274 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zfp26P10076 861 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Hoxc10P31257 342 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ephb2P54763 986 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 ZbbxQ0P5X5 716 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fubp3Q3TIX6 575 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 MyrflQ3UN70 904 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Usf2Q64705 346 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sgsm2Q80U12 1005 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ago4Q8CJF8 861 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr130Q8VFC1 317 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Bicc1Q99MQ1 977 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fam213aQ9CYH2 218 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mfsd2aQ9DA75 534 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cacng4Q9JJV4 327 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm17078M0QW51 211 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm17174M0QWQ9 212 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 MlxO08609 298 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Itgb1P09055 798 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rab3dP35276 219 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Wdr70Q3TWF6 657 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mup21Q80YX8 181 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Hps6Q8BLY7 805 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fra10ac1Q8BP78 315 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tspan14Q8QZY6 270 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Chchd6Q91VN4 273 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 ManfQ9CXI5 179 aaKnown RBP9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rmdn1Q9DCV4 305 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Plekho1Q9JIY0 408 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 ItgaxQ9QXH4 1169 aa9.19□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zscan20B2KFW1 1030 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 CrnnD3YUU6 520 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm11027G8JL69 66 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Prkag1O54950 330 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gpr182P43142 395 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Psmc6P62334 389 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Anxa7Q07076 463 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ccdc51Q3URS9 406 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tecpr1Q80VP0 1166 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gadl1Q80WP8 550 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pcyox1lQ8C7K6 495 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ccdc28aQ8CEI3 192 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Slc47a1Q8K0H1 567 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 V1ra11Q8R2E6 318 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Oasl1Q8VI94 511 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Atxn3Q9CVD2 355 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Castor1Q9CWQ8 331 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Thg1lQ9CY52 298 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Slc6a19Q9D687 634 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 ChmlQ9QZD5 621 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fut8Q9WTS2 575 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 EporP14753 507 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ca3P16015 260 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 ArntP53762 791 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fam207aP58468 219 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Atp8b2P98199 1209 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Eif1adQ3THJ3 170 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Papd5Q68ED3 633 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ush1gQ80T11 461 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nek11Q8C0Q4 628 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ints10Q8K2A7 710 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Akr1c20Q8VC77 323 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr784Q8VFZ9 319 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 FancgQ9EQR6 623 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pfdn5Q9WU28 154 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 A730046J19RikA0A1B0GSN8 89 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm2056J3QQ02 144 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ap2m1P84091 435 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ccdc177Q3UHB8 706 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Agap2Q3UHD9 1186 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 GanabQ8BHN3 944 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rbm34Q8C5L7 375 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Samd7Q8C8Y5 445 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr1466Q8VFW4 310 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cops7aQ9CZ04 275 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 NtsQ9D3P9 169 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Lpcat2bQ9D5U0 516 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 CrotQ9DC50 612 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ddx25Q9QY15 484 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zbed6D2EAC2 980 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 PtprhE9Q0N2 971 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Prdm14E9Q3T6 561 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zfp994J3QM38 661 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cops5O35864 334 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Per3O70361 1113 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fam131bQ3TY60 332 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Abhd15Q5F2F2 459 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Q7TT23 1179 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 DpcdQ8BPA8 203 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ttc23Q8CHY7 488 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rab7bQ8VEA8 199 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Msi2Q920Q6 346 aaKnown RBP9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Khdc3Q9CWU5 440 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Med10Q9CXU0 135 aa9.18□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Hddc3Q9D114 179 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms