RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Alg9Q8VDI9 611 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 AvenQ9D9K3 342 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Kif1cO35071 1100 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 DgkgQ91WG7 788 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Orc1Q9Z1N2 840 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm13088A2AGW6 460 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup10A2BIN1 180 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup14A2CEK7 180 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup19A9C497 187 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup15A9R9W0 180 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup17B5X0G2 180 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup8E9PVW0 235 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup7E9QA79 235 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup6P02762 180 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 TxnP10639 105 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup1P11588 180 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mup2P11589 180 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tbx3P70324 741 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 ZufspQ3T9Z9 577 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Proser1Q5PRE5 913 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 GpamQ61586 827 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mrgprb8Q7TN51 330 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Eps8l2Q99K30 729 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Magea4F2Z493 315 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Pou1f1Q00286 291 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Smcr8Q3UMB5 935 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Plcl1Q3USB7 1096 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nr6a1Q64249 495 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tmc3Q7TQ69 1130 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rsbn1Q80T69 795 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ttc24Q8BYG0 334 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 IlkapQ8R0F6 392 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nipsnap3bQ9CQE1 247 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 CenpnQ9CZW2 337 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fads2Q9Z0R9 444 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Zfp984A2A7A2 547 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 1700001J03RikQ80ZR8 219 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 GmppbQ8BTZ7 360 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Epm2aip1Q8VEH5 606 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Kcnh7Q9ER47 1195 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rpl5P47962 297 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Aqp1Q02013 269 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 RalgdsQ03385 852 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ctdnep1Q3TP92 244 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Dnajc1Q61712 552 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Usp50Q6P8X6 390 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rsl1d1Q8BVY0 452 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tlr9Q9EQU3 1032 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cldn3Q9Z0G9 219 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Znfx1Q8R151 1909 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm2244L7N2A3 218 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm3278L7N2D2 218 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gper1Q8BMP4 375 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sfrp1Q8C4U3 314 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 PaicsQ9DCL9 425 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Adgra2Q91ZV8 1336 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nedd1P33215 660 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sesn1P58006 492 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Dppa5bP85965 119 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Kansl1lQ5DTI6 991 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Maml1Q6T264 1020 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Lpin2Q99PI5 893 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nat9Q3UG98 241 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nars2Q8BGV0 477 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ints6lQ8BND4 861 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 TgdsQ8VDR7 355 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cyp2j6O54750 501 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tnpo3Q6P2B1 923 aaKnown RBP16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 PolbQ8K409 335 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ddi1Q9DAF3 408 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nek6Q9ES70 313 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 PnkpQ9JLV6 522 aaKnown RBP16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm13941A2AJ38 245 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm5407E9Q7Q1 248 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Stx4P70452 298 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fam91a1Q3UVG3 837 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Akr1c20Q8VC77 323 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cyp2c70Q91W64 489 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Zfand4D3Z3C6 739 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tpst1O70281 370 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Lad1P57016 528 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rhox12Q4TU81 186 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Defa17Q64016 82 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fam196bQ6GQV1 535 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fbxo28Q8BIG4 368 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Aim2Q91VJ1 354 aaKnown RBP16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 H2-M9O19442 342 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rpl3P27659 403 aaKnown RBP16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Plk1Q07832 603 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gpatch4Q3TFK5 415 aaKnown RBP16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ppp1r14bQ62084 147 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fam126aQ6P9N1 521 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 NrcamQ810U4 1256 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Grin3bQ91ZU9 1003 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Pkp2Q9CQ73 795 aaKnown RBP16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Trpc4apQ9JLV2 797 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Vav3Q9R0C8 847 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Klhl18A0A0G2JGN5 579 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm17333C6EQI3 125 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rfpl4bJ3QPR6 266 aa16.96■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms