RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Pfkfb2P70265 519 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Otol1Q4ZJM7 482 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Zdhhc17Q80TN5 632 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc25a24Q8BMD8 475 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mical2Q8BML1 960 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tp53bp2Q8CG79 1128 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Onecut3Q8K557 490 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Haus3Q8QZX2 570 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Iqsec1Q8R0S2 961 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 MtrexQ9CZU3 1040 aaKnown RBP10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tssk3Q9D2E1 268 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tmem79Q9D709 391 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pole3Q9JKP7 145 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PnkpQ9JLV6 522 aaKnown RBP10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Casz1Q9CWL2 1761 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 TprnA2AI08 749 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm5483B2RV77 97 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr600E9PUN7 314 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 R3hdm1E9Q9Q2 1135 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 AmhP27106 555 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PuraP42669 321 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mrgprx2Q3UG50 352 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Myl6Q60605 151 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Insm1Q63ZV0 521 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tbc1d12Q6A039 696 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fam107aQ78TU8 144 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Btnl1Q7TST0 509 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Q8BGA7 448 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Smim11aQ99J19 55 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc25a13Q9QXX4 676 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Klrc1Q9Z202 244 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nhsl1Q8CAF4 1587 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kdelc2G5E897 503 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Hk2O08528 917 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cops5O35864 334 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PrlP06879 226 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Oprl1P35377 367 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cct8P42932 548 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Glt6d1Q2NKH9 311 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Psg29Q3URN6 468 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Wee2Q66JT0 555 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fam120bQ6RI63 786 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Scn3bQ8BHK2 215 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Uba3Q8C878 462 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rtp1Q8C8C1 263 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sugp1Q8CH02 643 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Erich5Q8K0S2 362 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Txndc12Q9CQU0 170 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ttc30bQ9CY00 664 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 LrgukQ9D5S7 820 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kbtbd12Q9D618 625 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Echdc3Q9D7J9 300 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mrpl46Q9EQI8 283 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Prl2c5Q9JLV9 222 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ubr2Q6WKZ8 1755 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Adamtsl1Q8BLI0 1745 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm28168A0A087WNP1 180 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tbkbp1A2A9T0 611 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Atf6F6VAN0 656 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm8011K7N6Y5 207 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rpl21O09167 160 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 IapP03975 557 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Aldh2P47738 519 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Itga4Q00651 1039 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pih1d3Q3KNI6 218 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nqo1Q64669 274 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Magee1Q6PCZ4 918 aaKnown RBP10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Frmd4aQ8BIE6 1020 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Vwa1Q8R2Z5 415 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sec14l2Q99J08 403 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 TroapB7ZNG4 668 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 2210016F16RikG3X8U3 338 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Vmn2r39L7N2E5 861 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 FaahO08914 579 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc1a6O35544 561 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 JchainP01592 159 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc38a5Q3U1J0 479 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Armc7Q3UJZ3 198 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gpr151Q7TSN6 422 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Thnsl1Q8BH55 747 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dhx32Q8BZS9 744 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sept8Q8CHH9 429 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cog3Q8CI04 820 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Asb7Q91ZU0 318 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dcaf6Q9DC22 876 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cd97Q9Z0M6 818 aa10.18□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sec14l1A8Y5H7 715 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm20509G3UZF1 325 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Phka1P18826 1241 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 MafP54843 370 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sash1P59808 1230 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ak8Q32M07 479 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Faf2Q3TDN2 445 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fam172aQ3TNH5 417 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Trim67Q505D9 768 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kctd8Q50H33 476 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nfe2l2Q60795 597 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Exoc3l4Q6DIA2 721 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Msantd2Q6NZR2 559 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 SvoplQ6PDF3 494 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms