RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Lig4Q8BTF7 911 aa11.8□□□□□ -0.52
Herc4-201ENSMUST00000020258 Pak5Q8C015 719 aa11.8□□□□□ -0.52
Herc4-201ENSMUST00000020258 NaprtQ8CC86 538 aa11.8□□□□□ -0.52
Herc4-201ENSMUST00000020258 Smyd2Q8R5A0 433 aa11.8□□□□□ -0.52
Herc4-201ENSMUST00000020258 4930513O06RikQ9D549 161 aa11.8□□□□□ -0.52
Herc4-201ENSMUST00000020258 Olfr711Q9EPG2 314 aa11.8□□□□□ -0.52
Herc4-201ENSMUST00000020258 Spata31d1aE9QA35 1336 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Arhgef26D3YYY8 869 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Celf5D3Z4T1 395 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Erich2E9Q1A6 463 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Clk2O35491 499 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Trim71Q1PSW8 855 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Parp3Q3ULW8 533 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Nxpe4Q52KP5 543 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Caprin1Q60865 707 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 CbarpQ66L44 698 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 FAM120AQ6A0A9 1112 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Ccdc184Q8BMK5 191 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Gtse1Q8R080 741 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Trps1Q925H1 1281 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Tas1r2Q925I4 843 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Map4k3Q99JP0 894 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Npm3Q9CPP0 175 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Fam227aQ9D3V8 625 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Ccdc86Q9JJ89 426 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Tle2Q9WVB2 767 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Slc26a3Q9WVC8 757 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Zfp831A2ADM8 1628 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Ptar1E9QAB6 424 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Gm10801F7C7Q0 168 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Pou5f1P20263 352 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Tmem165P52875 323 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Pyroxd1Q3TMV7 498 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Als2clQ60I26 952 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Arl13bQ640N2 427 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Rbbp5Q8BX09 538 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Otud7aQ8R554 926 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Dnajc9Q91WN1 259 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Catsper1Q91ZR5 686 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Sntg2Q925E0 539 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Tbc1d15Q9CXF4 671 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 QpctQ9CYK2 362 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Psmd12Q9D8W5 456 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Tmbim4Q9DA39 238 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 LipaQ9Z0M5 397 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Atp6v1c1Q9Z1G3 382 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Gm1141B9EJU1 475 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Vmn2r100E9QAZ9 850 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 FaahO08914 579 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Nr3c1P06537 783 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 ItgalP24063 1163 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Cd36Q08857 472 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Arhgap20Q6IFT4 1182 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Rad9bQ6WBX7 403 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 MogsQ80UM7 834 aaKnown RBP11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Il17reQ8BH06 637 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 HscbQ8K3A0 234 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Dedd2Q8QZV0 330 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Pcdha6Q91Y14 946 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Nipsnap3bQ9CQE1 247 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Lrrc71Q9D3W5 558 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Tle6Q9WVB3 581 aa11.79□□□□□ -0.52
Herc4-201ENSMUST00000020258 Pgap3A2A559 320 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Sh3pxd2bA2AAY5 908 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 A630010A05RikA9C473 232 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Pex10B1AUE5 324 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 2610028H24RikG5E8K1 270 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Chrna1P04756 457 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 LmnaP48678 665 aaKnown RBP11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Gabrb2P63137 512 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Elac2Q80Y81 831 aaKnown RBP11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Q810S2 196 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Afap1l1Q8BZI0 768 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Adgrg2Q8CJ12 1009 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Coq6Q8R1S0 476 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Hdhd5Q91WM2 419 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Med21Q9CQ39 144 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Prg3Q9JL95 222 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Kcng1A2BDX4 514 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Zbtb41Q811F1 908 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Slc9a4Q8BUE1 797 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Cyp2c50Q91X77 490 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Rin1Q921Q7 763 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Trim8Q99PJ2 551 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Vta1Q9CR26 309 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Fam162aQ9D6U8 155 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 PodxlQ9R0M4 503 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Top3bQ9Z321 862 aaKnown RBP11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Gm4302E9PX25 294 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Ifnar2O35664 513 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Krt6aP50446 553 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 PrkcqQ02111 707 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Pitpnm3Q3UHE1 974 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Serpina3bQ8BYY9 420 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Brat1Q8C3R1 822 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Slc15a5Q8CBB2 566 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Acad10Q8K370 1069 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Clptm1Q8VBZ3 664 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Gstt4Q9D4P7 240 aa11.78□□□□□ -0.52
Herc4-201ENSMUST00000020258 Tnfsf13bQ9WU72 309 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms