RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Cntnap5aQ0V8T9 1304 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Acp4D3YTS9 425 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Pik3r2O08908 722 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Myl1P05977 188 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Ca8P28651 291 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Atxn7l3bQ3UD01 97 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Gcnt3Q5JCT0 437 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Prl3a1Q78Y73 227 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Vopp1Q8R1C3 172 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 PdgfdQ925I7 370 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Psmd9Q9CR00 222 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 QpctQ9CYK2 362 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Paip2Q9D6V8 124 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Tspan17Q9D7W4 270 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Magel2Q9QZ04 1284 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Trpv2Q9WTR1 756 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Ank3G5E8K5 1961 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 2010300C02RikE9Q3M9 1175 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Ccnb1P24860 430 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 IppP28575 584 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Fmo3P97501 534 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 IhhP97812 411 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 CttnQ60598 546 aaKnown RBP16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Tpp2Q64514 1262 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Stx3Q64704 289 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Gemin4Q6P6L6 1058 aaKnown RBP16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Cwf19l2Q8BG79 887 aaKnown RBP16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Grik4Q8BMF5 956 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Arhgap29Q8CGF1 1266 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Il36gQ8R460 164 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Tmbim4Q9DA39 238 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Prl2a1Q9JHK0 228 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Msh5Q9QUM7 833 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Tle6Q9WVB3 581 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Mtm1Q9Z2C5 603 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Gm8444F6XS56 118 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Olfr731F8VQB9 326 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Ccr5P51682 354 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Stxbp5lQ5DQR4 1185 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Htr1aQ64264 421 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Dnajc6Q80TZ3 938 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 HomezQ80W88 542 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Pcmtd2Q8BHD8 359 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Pggt1bQ8BUY9 377 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Trim32Q8CH72 655 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Taf11Q99JX1 211 aa16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Myo18aQ9JMH9 2050 aaKnown RBP16.91■□□□□ 0.3
Shh-201ENSMUST00000002708 Arhgef37A1IGU4 676 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Fignl2J3QK54 644 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Olfr611K7N609 323 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Olfr612L7N462 323 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 PtgisO35074 501 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Nedd9O35177 833 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Cyp2f2P33267 491 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 PfkmP47857 780 aaKnown RBP16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Fermt1P59113 677 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Q3TQQ9 903 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 ADGRF3Q58Y75 991 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Chi3l1Q61362 389 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Atg16l1Q8C0J2 607 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Taco1Q8K0Z7 294 aaKnown RBP16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Pcdhgb1Q91XX8 918 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Znf687Q9D2D7 1237 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Vmn2r84D3YWE3 849 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Serpinb9O08797 374 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Pgk2P09041 417 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Hoxb8P09632 243 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 ItgavP43406 1044 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Psma2P49722 234 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 SnnP61807 88 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Neurog2P70447 263 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Pdcd1Q02242 288 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Slc38a5Q3U1J0 479 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Xlr3aQ60595 226 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Rnf220Q6PDX6 566 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Dis3lQ8C0S1 1053 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Clptm1Q8VBZ3 664 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Ddx1Q91VR5 740 aaKnown RBP16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Hdhd5Q91WM2 419 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Polr3hQ9D2C6 204 aaKnown RBP16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Slc25a19Q9DAM5 318 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Tubb3Q9ERD7 450 aa16.9■□□□□ 0.3
Shh-201ENSMUST00000002708 Mindy4b-psA0A1W2P7H6 457 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Rad54bQ6PFE3 886 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Olfr299Q7TS05 330 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Cdkn2aipQ8BI72 563 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Il31raQ8K5B1 716 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Spats2lQ91WJ7 558 aaKnown RBP16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Prmt7Q922X9 692 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 CoprsQ9CQ13 173 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Mtmr7Q9Z2C9 660 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Arhgef26D3YYY8 869 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Gm4302E9PX25 294 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Alox15P39654 663 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 TktP40142 623 aaKnown RBP16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Dsc2P55292 902 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Nab1Q61122 486 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Prmt6Q6NZB1 378 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Arrdc3Q7TPQ9 414 aa16.89■□□□□ 0.29
Shh-201ENSMUST00000002708 Tbx10Q810F8 385 aa16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms