RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 TFDP2Q14188 446 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 ELMSAN1Q6PJG2 1045 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 HOOK3Q86VS8 718 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 DEFB106AQ8N104 65 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 BTN2A3PQ96KV6 586 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 HERPUD2Q9BSE4 406 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.44□□□□□ -1.38
RGPD1-206ENST00000641458 SLC2A11Q9BYW1 496 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 PIGVQ9NUD9 493 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 RIMKLBQ9ULI2 386 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 E2F8A0AVK6 867 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 PPFIA2O75334 1257 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 GCATO75600 419 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 PENKP01210 267 aaPredicted RBP6.44□□□□□ -1.38
RGPD1-206ENST00000641458 PDGFRAP16234 1089 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 DNAJB2P25686 324 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 ILF2Q12905 390 aaKnown RBP6.44□□□□□ -1.38
RGPD1-206ENST00000641458 FAM102AQ5T9C2 384 aaPredicted RBP6.44□□□□□ -1.38
RGPD1-206ENST00000641458 TAF3Q5VWG9 929 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 BZW1Q7L1Q6 419 aaKnown RBP6.44□□□□□ -1.38
RGPD1-206ENST00000641458 DAAM2Q86T65 1068 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 COG1Q8WTW3 980 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 VAT1Q99536 393 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 LBHD1Q9BQE6 289 aaPredicted RBP6.44□□□□□ -1.38
RGPD1-206ENST00000641458 USP29Q9HBJ7 922 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 ATP13A1Q9HD20 1204 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 EPS15L1Q9UBC2 864 aa6.44□□□□□ -1.38
RGPD1-206ENST00000641458 FARP1Q9Y4F1 1045 aaPredicted RBP6.44□□□□□ -1.38
RGPD1-206ENST00000641458 CLDN5O00501 218 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 TLL1O43897 1013 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 SUN1O94901 812 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ZRANB2O95218 330 aaKnown RBP eCLIP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 CD19P15391 556 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 STIP1P31948 543 aaKnown RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 USP46P62068 366 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 CDK16Q00536 496 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 UBA3Q8TBC4 463 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 CASKIN2Q8WXE0 1202 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 CASP10Q92851 521 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 QKIQ96PU8 341 aaKnown RBP eCLIP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 TMEM109Q9BVC6 243 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ACE2Q9BYF1 805 aaPredicted RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 PDFQ9HBH1 243 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 LRRC4Q9HBW1 653 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ANLNQ9NQW6 1124 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 LIASO43766 372 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 PDGFRBP09619 1106 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 MAP3K7CLP57077 242 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 CAV1Q03135 178 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 GPR149Q86SP6 731 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 TAC4Q86UU9 113 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 UNC45BQ8IWX7 931 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 SNRNP25Q9BV90 132 aaKnown RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 OSBPL8Q9BZF1 889 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 SFXN1Q9H9B4 322 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 GDE1Q9NZC3 331 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 WHRNQ9P202 907 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 CACNG4Q9UBN1 327 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 CHD7Q9P2D1 2997 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 MTSS1O43312 755 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 TCEA3O75764 348 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 RNF8O76064 485 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ACRP10323 421 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 RHOQP17081 205 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ACAT1P24752 427 aaKnown RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 OR1D2P34982 312 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 EIF2DP41214 584 aaKnown RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 PPIDQ08752 370 aaKnown RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ENPP2Q13822 863 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 P3H1Q32P28 736 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 SYPL2Q5VXT5 272 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 KIAA1841Q6NSI8 718 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 SCUBE3Q8IX30 993 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 POF1BQ8WVV4 589 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 RIN2Q8WYP3 895 aaPredicted RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ALG14Q96F25 216 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 IL12RB2Q99665 862 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ZDHHC18Q9NUE0 388 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 FAM49BQ9NUQ9 324 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 INPP5FQ9Y2H2 1132 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ANHXE9PGG2 379 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 EIF3HO15372 352 aaKnown RBP eCLIP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 TJP3O95049 919 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 DESP17661 470 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 MCM3P25205 808 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ARID5AQ03989 594 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 RFTN1Q14699 578 aaPredicted RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ZC3H12AQ5D1E8 599 aaKnown RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 HFE2Q6ZVN8 426 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 SETD3Q86TU7 594 aaPredicted RBP6.43□□□□□ -1.38
RGPD1-206ENST00000641458 MAP7D3Q8IWC1 876 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 MCUQ8NE86 351 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 PCDH19Q8TAB3 1148 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 CLEC4CQ8WTT0 213 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 FAM172AQ8WUF8 416 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 NXPE3Q969Y0 559 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 SGSM3Q96HU1 749 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ANKZF1Q9H8Y5 726 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 ARNT2Q9HBZ2 717 aa6.43□□□□□ -1.38
RGPD1-206ENST00000641458 TFR2Q9UP52 801 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms