RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 FAM183BPQ6ZVS7 135 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 DDX53Q86TM3 631 aaKnown RBP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 WNT8BQ93098 351 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 CCDC126Q96EE4 140 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 PCDHB5Q9Y5E4 795 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 ADGRA2Q96PE1 1338 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 ZMYM2Q9UBW7 1377 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 WDR27A2RRH5 827 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 SOAT2O75908 522 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 USP17L7P0C7H9 530 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 HDAC4P56524 1084 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 AUHQ13825 339 aaKnown RBP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 CAPRIN2Q6IMN6 1127 aaKnown RBP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 POLNQ7Z5Q5 900 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 GPR142Q7Z601 462 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 TFAP2DQ7Z6R9 452 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 PIGZQ86VD9 579 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 TMEM86AQ8N2M4 240 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 RNF217Q8TC41 542 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 EME1Q96AY2 570 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 PGLYRP2Q96PD5 576 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 TMEM120AQ9BXJ8 343 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 WARS2Q9UGM6 360 aaKnown RBP18.07■□□□□ 0.48
SCARB2-223ENST00000640640 CRLS1Q9UJA2 301 aa18.07■□□□□ 0.48
SCARB2-223ENST00000640640 LLGL2Q6P1M3 1020 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 LRRC39Q96DD0 335 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 SRPK1Q96SB4 655 aaKnown RBP18.06■□□□□ 0.48
SCARB2-223ENST00000640640 GPR20Q99678 358 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 ADAM2Q99965 735 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 HACD1B0YJ81 288 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 SMIM10L2AP0DMW4 78 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 SMIM10L2BP0DMW5 78 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 OXCT1P55809 520 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 FAAP100Q0VG06 881 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 ILDR2Q71H61 639 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 PALB2Q86YC2 1186 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 HELQQ8TDG4 1101 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 SNRNP25Q9BV90 132 aaKnown RBP18.06■□□□□ 0.48
SCARB2-223ENST00000640640 APOL5Q9BWW9 433 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 BRD8Q9H0E9 1235 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 TRMT6Q9UJA5 497 aaKnown RBP18.06■□□□□ 0.48
SCARB2-223ENST00000640640 TRHDEQ9UKU6 1024 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 SLC15A5A6NIM6 579 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 ASMTLO95671 621 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 MMP8P22894 467 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 NUDT2P50583 147 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 SCNN1GP51170 649 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 RASA2Q15283 850 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 RNF157Q96PX1 679 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 DHX33Q9H6R0 707 aaKnown RBP18.06■□□□□ 0.48
SCARB2-223ENST00000640640 CYP4F12Q9HCS2 524 aa18.06■□□□□ 0.48
SCARB2-223ENST00000640640 SRP72O76094 671 aaKnown RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 EGFRP00533 1210 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 LRG1P02750 347 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 RPL22P35268 128 aaKnown RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 MLH1P40692 756 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 TUBP50607 506 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 RENBPP51606 427 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 STX5Q13190 355 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 KBTBD12Q3ZCT8 623 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 FOXR1Q6PIV2 292 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 FAM136AQ96C01 138 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 APOPT1Q96IL0 206 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 TMEM106CQ9BVX2 250 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 SNCAIPQ9Y6H5 919 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 COL1A1P02452 1464 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 SPDYE5A6NIY4 337 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 NPR3P17342 541 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 TBX4P57082 545 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 POU4F1Q01851 419 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 KCTD19Q17RG1 926 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 LZTR1Q8N653 840 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 MRPS31Q92665 395 aaKnown RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 KAT2BQ92831 832 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 USP13Q92995 863 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 GPAMQ9HCL2 828 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 RIC8BQ9NVN3 520 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 NCKIPSDQ9NZQ3 722 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 hCG_1818297A0A087WSY0 165 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 MBL2P11226 248 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 ADRA1DP25100 572 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 ATN1P54259 1190 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 N4BP2L1Q5TBK1 243 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 SEL1L3Q68CR1 1132 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 NPNTQ6UXI9 565 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 EFL1Q7Z2Z2 1120 aaKnown RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 ALLCQ8N6M5 410 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 C12orf29Q8N999 325 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 ART4Q93070 314 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 WNK4Q96J92 1243 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 SERPINB11Q96P15 392 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 TKTL2Q9H0I9 626 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-223ENST00000640640 AKAP10O43572 662 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 USP12O75317 370 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 NUDT17P0C025 328 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 CALB2P22676 271 aa18.05■□□□□ 0.48
SCARB2-223ENST00000640640 PCBP1Q15365 356 aaKnown RBP eCLIP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms