RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 CGNQ9P2M7 1197 aaKnown RBP12.17□□□□□ -0.46
MECP2-226ENST00000640414 EIF2B4Q9UI10 523 aaKnown RBP12.17□□□□□ -0.46
MECP2-226ENST00000640414 SLCO1B1Q9Y6L6 691 aa12.17□□□□□ -0.46
MECP2-226ENST00000640414 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
MECP2-226ENST00000640414 SPTA1P02549 2419 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 E2F8A0AVK6 867 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 METTL12A8MUP2 240 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 KCNJ18B7U540 433 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 WASH3PC4AMC7 463 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 PRRT4C9JH25 899 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 HUS1O60921 280 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 ATP2C2O75185 946 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 FGFR1OPO95684 399 aaKnown RBP12.16□□□□□ -0.46
MECP2-226ENST00000640414 ABL1P00519 1130 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 JUPP14923 745 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 CDK11BP21127 795 aaKnown RBP12.16□□□□□ -0.46
MECP2-226ENST00000640414 GRIK1P39086 918 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 PNPLA4P41247 253 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 CASP4P49662 377 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 CSNK1EP49674 416 aaKnown RBP12.16□□□□□ -0.46
MECP2-226ENST00000640414 CYP2J2P51589 502 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 RTP5Q14D33 572 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 SCARA3Q6AZY7 606 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 GRAMD4Q6IC98 578 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 FAM171BQ6P995 826 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 METTL3Q86U44 580 aaKnown RBP12.16□□□□□ -0.46
MECP2-226ENST00000640414 DDX42Q86XP3 938 aaKnown RBP eCLIP12.16□□□□□ -0.46
MECP2-226ENST00000640414 TMEM25Q86YD3 366 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 CREBRFQ8IUR6 639 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 TMEM86AQ8N2M4 240 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 OTUB2Q96DC9 234 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 HSPBP1Q9NZL4 362 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 USP36Q9P275 1121 aaKnown RBP12.16□□□□□ -0.46
MECP2-226ENST00000640414 SNX11Q9Y5W9 270 aa12.16□□□□□ -0.46
MECP2-226ENST00000640414 GOLGA8IPA6NC78 632 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 LRRC10BA6NIK2 292 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 GOLGA8JA6NMD2 632 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 KCNK3O14649 394 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 GABRDO14764 452 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 TRIM66O15016 1216 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 PCDHGA12O60330 932 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 GARTP22102 1010 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 BDNFP23560 247 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 POLR2BP30876 1174 aaKnown RBP12.15□□□□□ -0.46
MECP2-226ENST00000640414 HNF1BP35680 557 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 PPP3CCP48454 512 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 TPM4P67936 248 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 CCDC173Q0VFZ6 552 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 CEP135Q66GS9 1140 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 SLFN12LQ6IEE8 588 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 VSTM1Q6UX27 236 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 APTXQ7Z2E3 356 aaKnown RBP12.15□□□□□ -0.46
MECP2-226ENST00000640414 BBS7Q8IWZ6 715 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 SPACA3Q8IXA5 215 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 POMGNT1Q8WZA1 660 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 MYLPFQ96A32 169 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 WBP1Q96G27 269 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
MECP2-226ENST00000640414 CEP295NLQ96MC4 621 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 ARID3AQ99856 593 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 NRSN2Q9GZP1 204 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 MKRN2Q9H000 416 aaKnown RBP12.15□□□□□ -0.46
MECP2-226ENST00000640414 ITM2CQ9NQX7 267 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 SPHK2Q9NRA0 654 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 MAGEC2Q9UBF1 373 aaPredicted RBP12.15□□□□□ -0.46
MECP2-226ENST00000640414 FTSJ1Q9UET6 329 aa12.15□□□□□ -0.46
MECP2-226ENST00000640414 EXOC3O60645 756 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 GNA14O95837 355 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 ITGB3P05106 788 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 ANXA13P27216 316 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 PCSK1P29120 753 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 PSMC2P35998 433 aaKnown RBP12.14□□□□□ -0.47
MECP2-226ENST00000640414 TPMTP51580 245 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 PSMC1P62191 440 aaKnown RBP12.14□□□□□ -0.47
MECP2-226ENST00000640414 NOP14P78316 857 aaKnown RBP12.14□□□□□ -0.47
MECP2-226ENST00000640414 FANCCQ00597 558 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 TAF10Q12962 218 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 TARDBPQ13148 414 aaKnown RBP eCLIP12.14□□□□□ -0.476e-6■□□□□ 11.2
MECP2-226ENST00000640414 LY6DQ14210 128 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 KRT31Q15323 416 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 FUT11Q495W5 492 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 ADGRF2Q8IZF7 708 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 XXYLT1Q8NBI6 393 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 FGF11Q92914 225 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 WBP2Q969T9 261 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 SAAL1Q96ER3 474 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 TMEM176AQ96HP8 235 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 CRTAC1Q9NQ79 661 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 DNAJC17Q9NVM6 304 aaKnown RBP12.14□□□□□ -0.47
MECP2-226ENST00000640414 EHD2Q9NZN4 543 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 LIMA1Q9UHB6 759 aaKnown RBP12.14□□□□□ -0.47
MECP2-226ENST00000640414 AGO2Q9UKV8 859 aaKnown RBP12.14□□□□□ -0.47
MECP2-226ENST00000640414 AGAP1Q9UPQ3 857 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 PCDHGA1Q9Y5H4 931 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 SNX9Q9Y5X1 595 aa12.14□□□□□ -0.47
MECP2-226ENST00000640414 MGAQ8IWI9 3026 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms