RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ZXDAP98168 799 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 ATP11AP98196 1134 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 OGDHQ02218 1023 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 NNTQ13423 1086 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 CDO1Q16878 200 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 SLC25A52Q3SY17 297 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 ZC3H12AQ5D1E8 599 aaKnown RBP13.74□□□□□ -0.21
GTF3A-209ENST00000640289 SH3PXD2AQ5TCZ1 1133 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 DCUN1D2Q6PH85 259 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 RAD9BQ6WBX8 426 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 ARCQ7LC44 396 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 BAG1Q99933 345 aaPredicted RBP13.74□□□□□ -0.21
GTF3A-209ENST00000640289 TRIM7Q9C029 511 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 HEBP1Q9NRV9 189 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 PARVAQ9NVD7 372 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 RRN3Q9NYV6 651 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 CCP110O43303 1012 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 MOCS2O96007 188 aaPredicted RBP13.73□□□□□ -0.21
GTF3A-209ENST00000640289 CYP1A2P05177 515 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 SOX9P48436 509 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 HARS2P49590 506 aaKnown RBP13.73□□□□□ -0.21
GTF3A-209ENST00000640289 KPNA1P52294 538 aaPredicted RBP13.73□□□□□ -0.21
GTF3A-209ENST00000640289 VCPP55072 806 aaKnown RBP13.73□□□□□ -0.21
GTF3A-209ENST00000640289 GSDMDP57764 484 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 DEUP1Q05D60 604 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 RING1Q06587 406 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 RUNX3Q13761 415 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 PDGFRLQ15198 375 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 BNIPLQ7Z465 357 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 UBALD2Q8IYN6 164 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 CCDC170Q8IYT3 715 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 ADGRG2Q8IZP9 1017 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 CSGALNACT1Q8TDX6 532 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 DCLK3Q9C098 648 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 ECT2Q9H8V3 914 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 TBC1D14Q9P2M4 693 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 XPO7Q9UIA9 1087 aaKnown RBP13.73□□□□□ -0.21
GTF3A-209ENST00000640289 CA14Q9ULX7 337 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 SCINQ9Y6U3 715 aa13.73□□□□□ -0.21
GTF3A-209ENST00000640289 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
GTF3A-209ENST00000640289 GOLGA6L7A0A1B0GV03 622 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 TMEM191CA6NGB0 347 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 TNFRSF10AO00220 468 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
GTF3A-209ENST00000640289 NDUFA10O95299 355 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 NFATC1O95644 943 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 CYP17A1P05093 508 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 H2AFZP0C0S5 128 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 TMEM253P0C7T8 217 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
GTF3A-209ENST00000640289 PTPN9P43378 593 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 ZNF252P-AS1Q0IIN9 211 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 SLC44A4Q53GD3 710 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 NUGGCQ68CJ6 796 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 RHBDF2Q6PJF5 856 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 TPGS1Q6ZTW0 290 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 H2AFVQ71UI9 128 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 UNC45BQ8IWX7 931 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 KIAA1958Q8N8K9 716 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 FAM172AQ8WUF8 416 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 EDAQ92838 391 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 DNASE1L2Q92874 299 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 ATP2A3Q93084 1043 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 RNF34Q969K3 372 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 OTUB2Q96DC9 234 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 PGAP3Q96FM1 320 aaPredicted RBP13.72□□□□□ -0.21
GTF3A-209ENST00000640289 P2RY11Q96G91 374 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 NUP85Q9BW27 656 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 TRPV5Q9NQA5 729 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 ANLNQ9NQW6 1124 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 TMPRSS4Q9NRS4 437 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 FBXL21Q9UKT6 434 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 TFR2Q9UP52 801 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 ZNF510Q9Y2H8 683 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 EPN1Q9Y6I3 576 aaPredicted RBP13.72□□□□□ -0.21
GTF3A-209ENST00000640289 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
GTF3A-209ENST00000640289 KRBA1A5PL33 1030 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 KCNU1A8MYU2 1149 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 EIF3CLB5ME19 914 aaKnown RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 I6L893 689 aaPredicted RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 TRDMT1O14717 391 aaKnown RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 ACSL4O60488 711 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 TSPAN3O60637 253 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 ENDOD1O94919 500 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 LCA5LO95447 670 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 APOEP02649 317 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 SLC6A4P31645 630 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 CCR1P32246 355 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 RDXP35241 583 aaKnown RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 MAGEA1P43355 309 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 CXCR3P49682 368 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 ZNF143P52747 638 aaPredicted RBP13.71□□□□□ -0.21
GTF3A-209ENST00000640289 PFKPQ01813 784 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 DHCR24Q15392 516 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 LY6G5CQ5SRR4 150 aa13.71□□□□□ -0.21
GTF3A-209ENST00000640289 NADSYN1Q6IA69 706 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms