RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 NRDE2Q9H7Z3 1164 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 H2AFYO75367 372 aaKnown RBP17.1■□□□□ 0.33
SCARB2-210ENST00000638567 NFICP08651 508 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 SLC25A3Q00325 362 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 KYAT3Q6YP21 454 aaKnown RBP17.1■□□□□ 0.33
SCARB2-210ENST00000638567 JOSD2Q8TAC2 188 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 BLOC1S5Q8TDH9 187 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 PPP1R2P1Q96PQ5 205 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 RNF157Q96PX1 679 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 TMEM109Q9BVC6 243 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 RUBCNLQ9H714 662 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 APPL1Q9UKG1 709 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 ADGRA3Q8IWK6 1321 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
SCARB2-210ENST00000638567 RAG1P15918 1043 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 SKIV2L2P42285 1042 aaKnown RBP17.1■□□□□ 0.33
SCARB2-210ENST00000638567 FASTKD3Q14CZ7 662 aaKnown RBP17.1■□□□□ 0.33
SCARB2-210ENST00000638567 SLC1A5Q15758 541 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 AGKQ53H12 422 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 SPDYAQ5MJ70 313 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 ISLR2Q6UXK2 745 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 SLC51AQ86UW1 340 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 EDEM1Q92611 657 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 PCDHA2Q9Y5H9 948 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 ERVK-10P10266 1014 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 PGAM1P18669 254 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 AKAP5P24588 427 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 NR2C2P49116 596 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 ZNF143P52747 638 aaPredicted RBP17.1■□□□□ 0.33
SCARB2-210ENST00000638567 ZBTB17Q13105 803 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 CHSY1Q86X52 802 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 SNX32Q86XE0 403 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 SLC2A14Q8TDB8 520 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 BSNDQ8WZ55 320 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 FICDQ9BVA6 458 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 LATS2Q9NRM7 1088 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 IL1RAPL1Q9NZN1 696 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 CD274Q9NZQ7 290 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 SLCO1B7G3V0H7 640 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 TNPO2O14787 897 aaKnown RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 RHOBTB1O94844 696 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 BNIP1Q12981 228 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 OASLQ15646 514 aaKnown RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 CEP19Q96LK0 163 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 UBE2OQ9C0C9 1292 aaKnown RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 KIF17Q9P2E2 1029 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 NOCTQ9UK39 431 aaKnown RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 STXBP5LQ9Y2K9 1186 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 ZMYM2Q9UBW7 1377 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 SPEF2Q9C093 1822 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 INPP1P49441 399 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 HDAC4P56524 1084 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 ZDHHC24Q6UX98 284 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 FAM13CQ8NE31 585 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 L3MBTL3Q96JM7 780 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 P2RX7Q99572 595 aaKnown RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 SNRNP25Q9BV90 132 aaKnown RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 TIMM13Q9Y5L4 95 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 TRUB2O95900 331 aaKnown RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 PYGLP06737 847 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 CHRNB2P17787 502 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 NFKBIAP25963 317 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 PLIN5Q00G26 463 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 PLEKHA7Q6IQ23 1121 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 KCNMB4Q86W47 210 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 ERO1BQ86YB8 467 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 GFM2Q969S9 779 aaKnown RBP17.09■□□□□ 0.33
SCARB2-210ENST00000638567 MECRQ9BV79 373 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 LZTS1Q9Y250 596 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 SLC30A1Q9Y6M5 507 aa17.09■□□□□ 0.33
SCARB2-210ENST00000638567 PRKAA1Q13131 559 aa17.08■□□□□ 0.33
SCARB2-210ENST00000638567 C12orf65Q9H3J6 166 aaKnown RBP17.08■□□□□ 0.33
SCARB2-210ENST00000638567 MMADHCQ9H3L0 296 aaPredicted RBP17.08■□□□□ 0.33
SCARB2-210ENST00000638567 GPAMQ9HCL2 828 aa17.08■□□□□ 0.33
SCARB2-210ENST00000638567 ABI2Q9NYB9 513 aaPredicted RBP17.08■□□□□ 0.33
SCARB2-210ENST00000638567 TPP1O14773 563 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 CCDC153Q494R4 210 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 CDRT15Q96T59 188 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-210ENST00000638567 CASS4Q9NQ75 786 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 DISP2A7MBM2 1401 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 CCL15-CCL14A0A0B4J2E2 113 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 DDHD2O94830 711 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 CHRM3P20309 590 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 YY1P25490 414 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 CCL15Q16663 113 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 ZC3H12AQ5D1E8 599 aaKnown RBP17.08■□□□□ 0.32
SCARB2-210ENST00000638567 SH3BP5LQ7L8J4 393 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 PHF21BQ96EK2 531 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 FAR2Q96K12 515 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 KATNAL1Q9BW62 490 aa17.08■□□□□ 0.32
SCARB2-210ENST00000638567 PTPRAP18433 802 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 RECQLP46063 649 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 RTP1P59025 263 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 RIPK1Q13546 671 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 FUT11Q495W5 492 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 GRTP1Q5TC63 336 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 FAM183BPQ6ZVS7 135 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms