RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 DCAF6Q58WW2 860 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 HPS1Q92902 700 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 USP7Q93009 1102 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 C12orf66Q96MD2 445 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 KCTD10Q9H3F6 313 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 OSBPL3Q9H4L5 887 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 PLEKHG2Q9H7P9 1386 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 WRBO00258 174 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 P4HBP07237 508 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 TBCDQ9BTW9 1192 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 INTS2Q9H0H0 1204 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 TMEM216Q9P0N5 145 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 ASCC3Q8N3C0 2202 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 CCDC88AQ3V6T2 1871 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 ITGA2P17301 1181 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 OGNP20774 298 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 ULK1O75385 1050 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 RFX3P48380 749 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 MPP2Q14168 576 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 GPALPP1Q8IXQ4 340 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 TEKT5Q96M29 485 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 LIN7AO14910 233 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 PGRMC2O15173 223 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 HLA-DQA2P01906 255 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 PDGFRAP16234 1089 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 UGT1A5P35504 534 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 NEDD8Q15843 81 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 USP17L2Q6R6M4 530 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 RAPGEFL1Q9UHV5 662 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 MCM8Q9UJA3 840 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 AAASQ9NRG9 546 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 CDH7Q9ULB5 785 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 ABT1Q9ULW3 272 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 PCDHB6Q9Y5E3 794 aa19.82■□□□□ 0.76
CACNA1A-257ENST00000638009 OMPP47874 163 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 CACNA2D1P54289 1103 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PTGISQ16647 500 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PYDC2Q56P42 97 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 KDELC2Q7Z4H8 507 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 GGA3Q9NZ52 723 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PLOD3O60568 738 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 FRG1Q14331 258 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 ARHGAP27Q6ZUM4 889 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 SYN2Q92777 582 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 TPD52L3Q96J77 140 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 EFR3BQ9Y2G0 817 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 LOC110117498-PIK3R3F6TDL0 507 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 EPN2O95208 641 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 DNAJC3Q13217 504 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 ZNF248Q8NDW4 579 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PIK3R3Q92569 461 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 SPATA33Q96N06 139 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PHTF1Q9UMS5 762 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PCDHB2Q9Y5E7 798 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PNPLA4P41247 253 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PDX1P52945 283 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 MROH9Q5TGP6 573 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 MIER2Q8N344 545 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 SGF29Q96ES7 293 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 GPC6Q9Y625 555 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 H7C1W4 665 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 SKIV2L2P42285 1042 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 ERFP50548 548 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 ZNF746Q6NUN9 644 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 BRINP3Q76B58 766 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 GAL3ST3Q96A11 431 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PABPC3Q9H361 631 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 ENTPD4Q9Y227 616 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 LMTK3Q96Q04 1460 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 BROXQ5VW32 411 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 SCAIQ8N9R8 606 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 DNAJC1Q96KC8 554 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PSME2Q9UL46 239 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 PTCH1Q13635 1447 aa19.81■□□□□ 0.76
CACNA1A-257ENST00000638009 INPP4BO15327 924 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 CLOCKO15516 846 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 FCER1AP12319 257 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 ATP1A3P13637 1013 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 PRR5LQ6MZQ0 368 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 GATAD2AQ86YP4 633 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 NECTIN3Q9NQS3 549 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 GGT7Q9UJ14 662 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 MAGEB2O15479 319 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 RB1P06400 928 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 CYP2C8P10632 490 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 GPR15P49685 360 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 C8orf59Q8N0T1 100 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 ZNF669Q96BR6 464 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 LRRC1Q9BTT6 524 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 TCF7L2Q9NQB0 619 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 ACSL4O60488 711 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 PDGFRBP09619 1106 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 AKR1B1P15121 316 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 HOXA13P31271 388 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 TMPRSS6Q8IU80 811 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 CAPN10Q9HC96 672 aa19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 HBS1LQ9Y450 684 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-257ENST00000638009 TMCC2O75069 709 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms