RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 FAM86B1E9PN63 330 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 SOAT2O75908 522 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 RAG1P15918 1043 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 OXCT1P55809 520 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 RASAL3Q86YV0 1011 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 IGDCC4Q8TDY8 1250 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 MAGEA4P43358 317 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 KCTD14Q9BQ13 255 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 PACSIN1Q9BY11 444 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 CLPBQ9H078 707 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 TMEM138Q9NPI0 162 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 RGS18Q9NS28 235 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 FFAR2O15552 330 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 TAF6P49848 677 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 MCCD1P59942 119 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 MMRN1Q13201 1228 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 MTFR1Q15390 333 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 MILR1Q7Z6M3 343 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 ZNF473Q8WTR7 871 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 COLEC11Q9BWP8 271 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 PCDHB12Q9Y5F1 795 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 CHD1O14646 1710 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 PTGES3LE9PB15 166 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 CASP9P55211 416 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 FAM45AQ8TCE6 357 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 FAM111AQ96PZ2 611 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 RIBC2Q9H4K1 309 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 BPIFA1Q9NP55 256 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 HIST1H2ABP04908 130 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 CCNA2P20248 432 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 KCTD19Q17RG1 926 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 HIST3H2AQ7L7L0 130 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 HIST1H2ACQ93077 130 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 OLFM3Q96PB7 478 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 RIC8BQ9NVN3 520 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 GULP1Q9UBP9 304 aa17.42■□□□□ 0.38
CACNA1A-253ENST00000637927 ZNF862O60290 1169 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 MFN2O95140 757 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 RASA1P20936 1047 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 PCSK1P29120 753 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 POU6F1Q14863 301 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 GPAT3Q53EU6 434 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 RAP1GAP2Q684P5 730 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 DAW1Q8N136 415 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 ANKFN1Q8N957 763 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 FEZF2Q8TBJ5 459 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 ACER1Q8TDN7 264 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 LPAR1Q92633 364 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 OSBPL8Q9BZF1 889 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 THAP2Q9H0W7 228 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 NOL6Q9H6R4 1146 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 STARD7Q9NQZ5 370 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 ING3Q9NXR8 418 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 A0A075B6Q4 140 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 GSAPA4D1B5 854 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 BIRC5O15392 142 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 EPORP19235 508 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 PDK1Q15118 436 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 SLC18A3Q16572 532 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 TRIQKQ629K1 86 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 TRAPPC5Q8IUR0 188 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 NMD3Q96D46 503 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 DNAJC16Q9Y2G8 782 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 FCHO2Q0JRZ9 810 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 ARMCX4Q5H9R4 360 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 ADGRF2Q8IZF7 708 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 CALR3Q96L12 384 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 OXCT2Q9BYC2 517 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 EPB41L4AQ9HCS5 686 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 GALK1P51570 392 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 UGT3A1Q6NUS8 523 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 WDR60Q8WVS4 1066 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 MARCH7Q9H992 704 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 TMEM8AQ9HCN3 771 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 TBX20Q9UMR3 447 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 SNX12Q9UMY4 172 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 HBP1O60381 514 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 KRT6AP02538 564 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 KRT6BP04259 564 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 KRT6CP48668 564 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 FAM45BPQ6NSW5 357 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 JAMLQ86YT9 394 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 ELMO1Q92556 727 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 CASP10Q92851 521 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 ZNF222Q9UK12 451 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 TBC1D3BA6NDS4 549 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 DCLK1O15075 740 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 FXR1P51114 621 aaKnown RBP eCLIP17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 ITPK1Q13572 414 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 NEK6Q9HC98 313 aa17.41■□□□□ 0.38
CACNA1A-253ENST00000637927 SCN2BO60939 215 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 IRX1P78414 480 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 GFOD2Q3B7J2 385 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 TCHHL1Q5QJ38 904 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 KIRREL3Q8IZU9 778 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 KCNB2Q92953 911 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 MCUBQ9NWR8 336 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 SH3BGRL2Q9UJC5 107 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 NFKB1P19838 968 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms