RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ZNF419Q96HQ0 510 aaPredicted RBP19.34■□□□□ 0.69
CLN6-220ENST00000637450 ULBP1Q9BZM6 244 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 TSPAN16Q9UKR8 245 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 WASF3Q9UPY6 502 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 PLXND1Q9Y4D7 1925 aa19.33■□□□□ 0.69
CLN6-220ENST00000637450 SMC2O95347 1197 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 ZNF132P52740 706 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 BCAT1P54687 386 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 GFPT1Q06210 699 aaPredicted RBP19.33■□□□□ 0.68
CLN6-220ENST00000637450 SGO2Q562F6 1265 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 TRIML1Q8N9V2 468 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 DEFB124Q8NES8 71 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 SLC35C1Q96A29 364 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 PLD4Q96BZ4 506 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 CD93Q9NPY3 652 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 FSCN3Q9NQT6 498 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 HESX1Q9UBX0 185 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 ARMCX3Q9UH62 379 aaPredicted RBP19.33■□□□□ 0.68
CLN6-220ENST00000637450 CLEC4EQ9ULY5 219 aa19.33■□□□□ 0.68
CLN6-220ENST00000637450 ASCC3Q8N3C0 2202 aaKnown RBP19.32■□□□□ 0.68
CLN6-220ENST00000637450 GOLGA6L4A6NEF3 574 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 UPK3BL1B0FP48 263 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 UPK3BL2E5RIL1 263 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 CYBBP04839 570 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 IL12RB1P42701 662 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 YWHAEP62258 255 aaKnown RBP19.32■□□□□ 0.68
CLN6-220ENST00000637450 LRRC63Q05C16 580 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 BST2Q10589 180 aaKnown RBP19.32■□□□□ 0.68
CLN6-220ENST00000637450 STARD3Q14849 445 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 TRIP4Q15650 581 aaPredicted RBP19.32■□□□□ 0.68
CLN6-220ENST00000637450 FUT11Q495W5 492 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 PIP4P1Q86T03 277 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 UBR7Q8N806 425 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 UCMAQ8WVF2 138 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 ERCC4Q92889 916 aaPredicted RBP19.32■□□□□ 0.68
CLN6-220ENST00000637450 HSPA12BQ96MM6 686 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 SLC2A11Q9BYW1 496 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 GTPBP4Q9BZE4 634 aaKnown RBP19.32■□□□□ 0.68
CLN6-220ENST00000637450 SLC32A1Q9H598 525 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 LRRC4Q9HBW1 653 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 OLA1Q9NTK5 396 aaKnown RBP19.32■□□□□ 0.68
CLN6-220ENST00000637450 ELOVL2Q9NXB9 296 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 KIAA1257Q9ULG3 409 aa19.32■□□□□ 0.68
CLN6-220ENST00000637450 ASPMQ8IZT6 3477 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 TRIM49BA6NDI0 452 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 NDUFS2O75306 463 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 VDRP11473 427 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 CD19P15391 556 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 ATXN3P54252 364 aaPredicted RBP19.31■□□□□ 0.68
CLN6-220ENST00000637450 FOXC1Q12948 553 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 SEMA3BQ13214 749 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 KIAA1324Q6UXG2 1013 aaKnown RBP19.31■□□□□ 0.68
CLN6-220ENST00000637450 ANKS1BQ7Z6G8 1248 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 FMNL3Q8IVF7 1028 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 RBBP8NLQ8NC74 664 aaPredicted RBP19.31■□□□□ 0.68
CLN6-220ENST00000637450 UBA3Q8TBC4 463 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 DDI1Q8WTU0 396 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 KCTD13Q8WZ19 329 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 FOXJ1Q92949 421 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 SMARCE1Q969G3 411 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 GTPBP2Q9BX10 602 aaKnown RBP19.31■□□□□ 0.68
CLN6-220ENST00000637450 MKRN2Q9H000 416 aaKnown RBP19.31■□□□□ 0.68
CLN6-220ENST00000637450 PRDM16Q9HAZ2 1276 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 ITM2CQ9NQX7 267 aa19.31■□□□□ 0.68
CLN6-220ENST00000637450 TNRC6BQ9UPQ9 1833 aaKnown RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 CFAP47Q6ZTR5 3102 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 PI4KAP42356 2102 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 YJEFN3A6XGL0 299 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 E7ENQ6 273 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 O00370 1275 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 ARHGAP33O14559 1287 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 TIMM44O43615 452 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 TBXAS1P24557 533 aaPredicted RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 CD6P30203 668 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 HARS2P49590 506 aaKnown RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 ADIGQ0VDE8 80 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 LRMPQ12912 555 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 EIF4HQ15056 248 aaKnown RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 E2F5Q15329 346 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 PKDCCQ504Y2 493 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 BSPRYQ5W0U4 402 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 TMEM215Q68D42 235 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 SCML4Q8N228 414 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 RNF139Q8WU17 664 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 TIGD1Q96MW7 591 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 IPO9Q96P70 1041 aaKnown RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 METTL14Q9HCE5 456 aaKnown RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 WSB2Q9NYS7 404 aaPredicted RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 USP36Q9P275 1121 aaKnown RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 SFMBT1Q9UHJ3 866 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 STOML2Q9UJZ1 356 aa19.3■□□□□ 0.68
CLN6-220ENST00000637450 HBS1LQ9Y450 684 aaKnown RBP19.3■□□□□ 0.68
CLN6-220ENST00000637450 PMM2O15305 246 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 OPHN1O60890 802 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 PROS1P07225 676 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 SETSIPP0DME0 302 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 FMO5P49326 533 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 ZNF234Q14588 700 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 MPPE1Q53F39 396 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 SYCP2LQ5T4T6 812 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms