RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 HTR3DQ70Z44 454 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 ASCL5Q7RTU5 278 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 CSGALNACT1Q8TDX6 532 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 PLD4Q96BZ4 506 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 ZNF653Q96CK0 615 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 VCPIP1Q96JH7 1222 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 CCDC42Q96M95 316 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 SERPINB11Q96P15 392 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 HPS4Q9NQG7 708 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 DDIT4Q9NX09 232 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 GTSE1Q9NYZ3 720 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 IMPACTQ9P2X3 320 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 FBXL21Q9UKT6 434 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 CA14Q9ULX7 337 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 TCRBV5S1A1TA0A578 114 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 IRAK2O43187 625 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 IGLV3-25P01717 112 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 TFE3P19532 575 aaPredicted RBP17.91■□□□□ 0.46
CLN6-218ENST00000637223 SULT1E1P49888 294 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 SLC18A3Q16572 532 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 EML3Q32P44 896 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 OTUD1Q5VV17 481 aaPredicted RBP17.91■□□□□ 0.46
CLN6-218ENST00000637223 DENND1CQ8IV53 801 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 RXFP2Q8WXD0 754 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 DNASE1L2Q92874 299 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 CFAP57Q96MR6 1250 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 PANX2Q96RD6 677 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 DDX23Q9BUQ8 820 aaKnown RBP17.91■□□□□ 0.46
CLN6-218ENST00000637223 ADAM33Q9BZ11 813 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 HEBP1Q9NRV9 189 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 SPTLC3Q9NUV7 552 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 MYO1AQ9UBC5 1043 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 CNOT8Q9UFF9 292 aaKnown RBP17.91■□□□□ 0.46
CLN6-218ENST00000637223 STAP1Q9ULZ2 295 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 NENFQ9UMX5 172 aa17.91■□□□□ 0.46
CLN6-218ENST00000637223 SIGLEC16A6NMB1 481 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 M0QYT0 321 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 SLC9A3R1O14745 358 aaPredicted RBP17.9■□□□□ 0.46
CLN6-218ENST00000637223 RFC1P35251 1148 aaPredicted RBP17.9■□□□□ 0.46
CLN6-218ENST00000637223 HARS2P49590 506 aaKnown RBP17.9■□□□□ 0.46
CLN6-218ENST00000637223 KPNA1P52294 538 aaPredicted RBP17.9■□□□□ 0.46
CLN6-218ENST00000637223 NME3Q13232 169 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 NNTQ13423 1086 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 RUNX3Q13761 415 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 Q6ZNB5 142 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 KIAA1958Q8N8K9 716 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 ATP2A3Q93084 1043 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 TRIM11Q96F44 468 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 FCRL2Q96LA5 508 aaPredicted RBP17.9■□□□□ 0.46
CLN6-218ENST00000637223 MCEEQ96PE7 176 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 TBCBQ99426 244 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 NPY6RQ99463 290 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 DCLK3Q9C098 648 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 CALCOCO1Q9P1Z2 691 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 TBC1D14Q9P2M4 693 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 AGO1Q9UL18 857 aaKnown RBP17.9■□□□□ 0.46
CLN6-218ENST00000637223 TLR6Q9Y2C9 796 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 CACNA1AO00555 2505 aa17.9■□□□□ 0.46
CLN6-218ENST00000637223 OTOL1A6NHN0 477 aaPredicted RBP17.89■□□□□ 0.45
CLN6-218ENST00000637223 C2CD4BA6NLJ0 364 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 GOLGA6L6A8MZA4 724 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 PROB1E7EW31 1015 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 NFATC1O95644 943 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 IGLV3-27P01718 113 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 MYBL1P10243 752 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 PDGFRAP16234 1089 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 GBP1P32455 592 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 SOX9P48436 509 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 RPL7AP62424 266 aaKnown RBP17.89■□□□□ 0.45
CLN6-218ENST00000637223 MAMLD1Q13495 774 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 ITPRIPL2Q3MIP1 535 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 SLC25A52Q3SY17 297 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 SLC44A4Q53GD3 710 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 ZC3H12AQ5D1E8 599 aaKnown RBP17.89■□□□□ 0.45
CLN6-218ENST00000637223 PPP1R15BQ5SWA1 713 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 PLEKHA7Q6IQ23 1121 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 DCUN1D2Q6PH85 259 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 ARCQ7LC44 396 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 ERMP1Q7Z2K6 904 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 CPA6Q8N4T0 437 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 SLC39A13Q96H72 371 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 THAP2Q9H0W7 228 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 ECT2Q9H8V3 914 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 TRPV5Q9NQA5 729 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 ARHGEF3Q9NR81 526 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 PARVAQ9NVD7 372 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 RRN3Q9NYV6 651 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 WNT16Q9UBV4 365 aa17.89■□□□□ 0.45
CLN6-218ENST00000637223 KRBA1A5PL33 1030 aa17.88■□□□□ 0.45
CLN6-218ENST00000637223 MOCS2O96007 188 aaPredicted RBP17.88■□□□□ 0.45
CLN6-218ENST00000637223 CYP17A1P05093 508 aa17.88■□□□□ 0.45
CLN6-218ENST00000637223 GPD1P21695 349 aa17.88■□□□□ 0.45
CLN6-218ENST00000637223 SDC4P31431 198 aa17.88■□□□□ 0.45
CLN6-218ENST00000637223 DEKP35659 375 aaKnown RBP17.88■□□□□ 0.45
CLN6-218ENST00000637223 ATXN1P54253 815 aaKnown RBP17.88■□□□□ 0.45
CLN6-218ENST00000637223 GALCP54803 685 aa17.88■□□□□ 0.45
CLN6-218ENST00000637223 ATP11AP98196 1134 aa17.88■□□□□ 0.45
CLN6-218ENST00000637223 DEUP1Q05D60 604 aa17.88■□□□□ 0.45
CLN6-218ENST00000637223 RING1Q06587 406 aa17.88■□□□□ 0.45
CLN6-218ENST00000637223 EIF4EBP2Q13542 120 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms