RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TCRBV5S1A1TA0A578 114 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 SOWAHDA6NJG2 315 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 SIGLEC16A6NMB1 481 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 PIK3R2O00459 728 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 PAPSS1O43252 624 aaPredicted RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 ZSCAN12O43309 604 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 TADA3O75528 432 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 FTLP02792 175 aaPredicted RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 CYP1A2P05177 515 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 PLEKP08567 350 aaPredicted RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 SLC2A3P11169 496 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 KRT3P12035 628 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 MSNP26038 577 aaKnown RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 GABRR2P28476 465 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 MAN1A1P33908 653 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 NOS2P35228 1153 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 ARHGAP25P42331 645 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 MATKP42679 507 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 PTPN9P43378 593 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 YWHAGP61981 247 aaKnown RBP eCLIP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 GFPT1Q06210 699 aaPredicted RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 RING1Q06587 406 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 POU4F2Q12837 409 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 KIF5AQ12840 1032 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 TAF10Q12962 218 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 LEXMQ3ZCV2 418 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 PRSS36Q5K4E3 855 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 FAM102AQ5T9C2 384 aaPredicted RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 BTBD8Q5XKL5 378 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 LLGL2Q6P1M3 1020 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 SYCE2Q6PIF2 218 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 MMS22LQ6ZRQ5 1243 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 FAM183BPQ6ZVS7 135 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 STRADAQ7RTN6 431 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 BHLHA9Q7RTU4 235 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 GPRIN1Q7Z2K8 1008 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 RNF10Q8N5U6 811 aaKnown RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 CPA5Q8WXQ8 436 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 SUSD6Q92537 303 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 NT5C3BQ969T7 300 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 NXPE3Q969Y0 559 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 LPIN3Q9BQK8 851 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 S1PR5Q9H228 398 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 SMOC2Q9H3U7 446 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 TRPV4Q9HBA0 871 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 KCND1Q9NSA2 647 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 CLEC1BQ9P126 229 aa7.02□□□□□ -1.29
UPF3B-205ENST00000636792 CNOT8Q9UFF9 292 aaKnown RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 HBS1LQ9Y450 684 aaKnown RBP7.02□□□□□ -1.29
UPF3B-205ENST00000636792 TRAV19A0A0A6YYK7 116 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF840PA6NDX5 716 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 C2CD4BA6NLJ0 364 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 TULP2O00295 520 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 CAPN9O14815 690 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 CCL16O15467 120 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 IRAK2O43187 625 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 TLR5O60602 858 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 RFPL2O75678 378 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 IGLV3-25P01717 112 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 USP17L7P0C7H9 530 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 LCP1P13796 627 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 RRM1P23921 792 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 SDC4P31431 198 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 GBP1P32455 592 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 ATP5C1P36542 298 aaKnown RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 LTBRP36941 435 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 SLC1A1P43005 524 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 MAGEA1P43355 309 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 GPR15P49685 360 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 RGS7P49802 495 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF135P52742 658 aaPredicted RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF143P52747 638 aaPredicted RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 GALCP54803 685 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 SLC7A9P82251 487 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 COG7P83436 770 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 MAMLD1Q13495 774 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 PIGHQ14442 188 aaPredicted RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 SLC25A52Q3SY17 297 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 BRMS1LQ5PSV4 323 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 RARS2Q5T160 578 aaKnown RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 HECTD3Q5T447 861 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 BSPRYQ5W0U4 402 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 NUGGCQ68CJ6 796 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 OR6B2Q6IFH4 312 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 C11orf63Q6NUN7 778 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 DCUN1D2Q6PH85 259 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 RAD9BQ6WBX8 426 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 GAREM2Q75VX8 874 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 MTSS1LQ765P7 747 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 OTOP3Q7RTS5 596 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 BNIPLQ7Z465 357 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 KIAA1328Q86T90 577 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 VSIG1Q86XK7 387 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 PSTKQ8IV42 348 aaKnown RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 SCAMP5Q8TAC9 235 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 GIPC2Q8TF65 315 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 RNF139Q8WU17 664 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms