RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ATXN3P54252 364 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 PDE1BQ01064 536 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 RIPOR1Q6ZS17 1223 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 CTU1Q7Z7A3 348 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 CMC1Q7Z7K0 106 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 CRLF3Q8IUI8 442 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 ADGRF2Q8IZF7 708 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 PYDC1Q8WXC3 89 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 ZNF333Q96JL9 665 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 APOL2Q9BQE5 337 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 PHACTR1Q9C0D0 580 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 NRDE2Q9H7Z3 1164 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 TNFSF13BQ9Y275 285 aa14.51□□□□□ -0.09
CACNA1A-228ENST00000636610 TRAFD1O14545 582 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 CHADO15335 359 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 C1QAP02745 245 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 NCF2P19878 526 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 LMO2P25791 158 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 VHLP40337 213 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 KLC1Q07866 573 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 STX3Q13277 289 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 KCTD2Q14681 263 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 SOWAHAQ2M3V2 549 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 FASTKD1Q53R41 847 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 N4BP2L1Q5TBK1 243 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 STKLD1Q8NE28 680 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 PNPOQ9NVS9 261 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 RLFQ13129 1914 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 KRT38O76015 456 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 LUC7L3O95232 432 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 CD1EP15812 388 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 MGAT1P26572 445 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 FAM47CQ5HY64 1035 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 ATG14Q6ZNE5 492 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 ZNF534Q76KX8 674 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 RIOX2Q8IUF8 465 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 ENDOVQ8N8Q3 282 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 SIGLEC10Q96LC7 697 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 ZMAT2Q96NC0 199 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 OXCT2Q9BYC2 517 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 PPCSQ9HAB8 311 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 SSU72Q9NP77 194 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 CSADQ9Y600 493 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 A8MXQ7 604 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 TPP1O14773 563 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 CYP2C8P10632 490 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 RPS12P25398 132 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 SLC34A1Q06495 639 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 NME3Q13232 169 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 HEATR6Q6AI08 1181 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 CXorf38Q8TB03 319 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 AFG1LQ8WV93 481 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 KHSRPQ92945 711 aaKnown RBP eCLIP14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 HESX1Q9UBX0 185 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 AP4E1Q9UPM8 1137 aa14.5□□□□□ -0.09
CACNA1A-228ENST00000636610 POLR2AP24928 1970 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 IGKV6-21A0A0C4DH24 114 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 P4HA1P13674 534 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 MSX2P35548 267 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 OLFML1Q6UWY5 402 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 CHSY1Q86X52 802 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 CCNJLQ8IV13 435 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 FGD4Q96M96 766 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 SLC7A8Q9UHI5 535 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 PPM1HQ9ULR3 514 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 SCN1AP35498 2009 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 IL18RAPO95256 599 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 C22orf31O95567 290 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 EDNRBP24530 442 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 BAG6P46379 1132 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 GRM1Q13255 1194 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 LGSNQ5TDP6 509 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 SCUBE1Q8IWY4 988 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 PANX3Q96QZ0 392 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 SMARCAD1Q9H4L7 1026 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 TLE6Q9H808 572 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 GBA2Q9HCG7 927 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 XAB2Q9HCS7 855 aaKnown RBP14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 UBP1Q9NZI7 540 aa14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 CORO1CQ9ULV4 474 aaPredicted RBP14.49□□□□□ -0.09
CACNA1A-228ENST00000636610 SPECC1L-ADORA2AF8WAN1 911 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 ADCY6O43306 1168 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 TGFB3P10600 412 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 NUMBP49757 651 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 RBP5P82980 135 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 SLC6A3Q01959 620 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 USP4Q13107 963 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 DLG2Q15700 870 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 BOLA3Q53S33 107 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 ATG16L1Q676U5 607 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 LCLAT1Q6UWP7 414 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 IZUMO2Q6UXV1 221 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 APOBEC3FQ8IUX4 373 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 ULK2Q8IYT8 1036 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 EBNA1BP2Q99848 306 aaKnown RBP14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 ZCWPW1Q9H0M4 648 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 CAB39LQ9H9S4 337 aa14.48□□□□□ -0.09
CACNA1A-228ENST00000636610 KRT82Q9NSB4 513 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms