RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CAPNS1	P04632	268 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	INHBB	P09529	407 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	AOC1	P19801	751 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ABCB4	P21439	1286 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ACAT1	P24752	427 aa	Known RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ADRA1D	P25100	572 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	NPTX2	P47972	431 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	MCCD1	P59942	119 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ATP6V0D1	P61421	351 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	GPC5	P78333	572 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	DLG4	P78352	724 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	DMPK	Q09013	629 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	DRAP1	Q14919	205 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	RGS21	Q2M5E4	152 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TRIM71	Q2Q1W2	868 aa	Known RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	EFHC2	Q5JST6	749 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	RARS2	Q5T160	578 aa	Known RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TTC23L	Q6PF05	361 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	FRA10AC1	Q70Z53	315 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TTC7B	Q86TV6	843 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	BPHL	Q86WA6	291 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TICAM1	Q8IUC6	712 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	PQLC1	Q8N2U9	271 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TMEM161B	Q8NDZ6	487 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	HM13	Q8TCT9	377 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	WNK4	Q96J92	1243 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	C9orf72	Q96LT7	481 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.11	□□□□□ -0.63	9e-7	■□□□□ 10.1
CHD2-223	ENST00000636306	POP1	Q99575	1024 aa	Known RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	HIPK3	Q9H422	1215 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	PRELID1	Q9Y255	219 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	IFT52	Q9Y366	437 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	DENND3	A2RUS2	1198 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	CAPN8	A6NHC0	703 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ARHGAP42	A6NI28	874 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	CENPBD1	B2RD01	187 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	POC1B-GALNT4	F8VUJ3	575 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	CXCL11	O14625	94 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ATMIN	O43313	823 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	SPOP	O43791	374 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	LRRN2	O75325	713 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	SERPINB6	P35237	376 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC1A1	P43005	524 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	MARCKSL1	P49006	195 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	MFAP3	P55082	362 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TUBA1B	P68363	451 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ZNF200	P98182	395 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306		Q3C1V9	767 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ANKDD1A	Q495B1	522 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	CBWD6	Q4V339	395 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	EPC2	Q52LR7	807 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	BRDT	Q58F21	947 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	CBWD3	Q5JTY5	395 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	FAM209A	Q5JX71	171 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	CBWD5	Q5RIA9	395 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	C6orf183	Q5T699	404 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	IZUMO3	Q5VZ72	239 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	EGFLAM	Q63HQ2	1017 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ABHD15	Q6UXT9	468 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TUBA1A	Q71U36	451 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ENOSF1	Q7L5Y1	443 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ITIH5	Q86UX2	942 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	KBTBD6	Q86V97	674 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ERO1B	Q86YB8	467 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	KSR1	Q8IVT5	923 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ANKRD13A	Q8IZ07	590 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC7A5P1	Q8MH63	180 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	BANP	Q8N9N5	519 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	FBXO27	Q8NI29	283 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	RAB3IL1	Q8TBN0	382 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ACTRT2	Q8TDY3	377 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TRUB1	Q8WWH5	349 aa	Known RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	FAM167A	Q96KS9	214 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	C7orf26	Q96N11	449 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	DCLK3	Q9C098	648 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	RETREG1	Q9H6L5	497 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ZNF302	Q9NR11	478 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	MAN1C1	Q9NR34	630 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	CYP26B1	Q9NR63	512 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	NCKIPSD	Q9NZQ3	722 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ITGA11	Q9UKX5	1188 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	STRIP2	Q9ULQ0	834 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	RABL2B	Q9UNT1	228 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	N6AMT1	Q9Y5N5	214 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	DOCK5	Q9H7D0	1870 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	FARP2	O94887	1054 aa	Predicted RBP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	KLHL2	O95198	593 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	SERPINA6	P08185	405 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ALOX5	P09917	674 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	TGFB3	P10600	412 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	KRT4	P19013	534 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC5A3	P53794	718 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ESRRG	P62508	458 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	KCNJ8	Q15842	424 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	SNRNP35	Q16560	246 aa	Known RBP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	PUS10	Q3MIT2	529 aa	Known RBP	11.1	□□□□□ -0.63

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