RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TBC1D13Q9NVG8 400 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 PIRO00625 290 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SERPINB8P50452 374 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SLC25A11Q02978 314 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 AP1B1Q10567 949 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 STX3Q13277 289 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 MKRN4PQ13434 485 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CHADLQ6NUI6 762 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 RAB44Q7Z6P3 723 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CDR2LQ86X02 465 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CPT1BQ92523 772 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 EBNA1BP2Q99848 306 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ACBD6Q9BR61 282 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 UBE2OQ9C0C9 1292 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 DDX43Q9NXZ2 648 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 KCNK4Q9NYG8 393 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 GNRH1P01148 92 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 LTFP02788 710 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 FLT3P36888 993 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 BFSP2Q13515 415 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 LRRC14Q15048 493 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 LLGL1Q15334 1064 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 FAM47EQ6ZV65 393 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 PIGZQ86VD9 579 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 NAT8LQ8N9F0 302 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SLC2A14Q8TDB8 520 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 BRI3BPQ8WY22 251 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 PPP1R16BQ96T49 567 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CCDC68Q9H2F9 335 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 COMMD8Q9NX08 183 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SEPT10Q9P0V9 454 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SIX4Q9UIU6 781 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 TRIM49D1C9J1S8 452 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 C2CD2LO14523 706 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ABLIM1O14639 778 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 WFS1O76024 890 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ENDOD1O94919 500 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 WASHC2DQ5SRD0 308 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF354CQ86Y25 554 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ANKMY2Q8IV38 441 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ATPAF2Q8N5M1 289 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 PLD5Q8N7P1 536 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SLC7A14Q8TBB6 771 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 DNAJB3Q8WWF6 145 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SLC44A1Q8WWI5 657 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CPNE1Q99829 537 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 R3HDM2Q9Y2K5 976 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 GIPC1O14908 333 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 EDF1O60869 148 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 PDGFRBP09619 1106 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 AADACL2Q6P093 401 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 EFL1Q7Z2Z2 1120 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ARRDC4Q8NCT1 418 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ECT2Q9H8V3 914 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 IGSF9Q9P2J2 1179 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 FOCADQ5VW36 1801 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SHBGP04278 402 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 NCAM1P13591 858 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 IVDP26440 423 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CHKAP35790 457 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 GLUD2P49448 558 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SEMA5AQ13591 1074 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 AMHR2Q16671 573 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 PDPK2PQ6A1A2 396 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 LRRC8BQ6P9F7 803 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CYB5D1Q6P9G0 228 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 TBC1D1Q86TI0 1168 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 RNF169Q8NCN4 708 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 USP13Q92995 863 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SENP8Q96LD8 212 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SRPK1Q96SB4 655 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 FSD1LQ9BXM9 530 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 IL22Q9GZX6 179 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 LRRC4CQ9HCJ2 640 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 MYH8P13535 1937 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CREB3O43889 395 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 RTN3O95197 1032 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 COL6A2P12110 1019 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CCDC130P13994 396 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 MAGEA6P43360 314 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 C2CD6Q53TS8 623 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 FAM133BQ5BKY9 247 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 DCLRE1AQ6PJP8 1040 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 KCNT2Q6UVM3 1135 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 VSTM1Q6UX27 236 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 NDUFAF2Q8N183 169 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 FUBP3Q96I24 572 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 C7orf26Q96N11 449 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 NACA2Q9H009 215 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 Q9H521 79 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 VPS45Q9NRW7 570 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 DDIT4Q9NX09 232 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 GOLGA8MH3BSY2 632 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 PIK3R2O00459 728 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CALB2P22676 271 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CCR1P32246 355 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SERPINB5P36952 375 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 TUSC3Q13454 348 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 TNFAIP8L3Q5GJ75 292 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms