RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GET4Q7L5D6 327 aaPredicted RBP15.05■□□□□ -0
LINC00339-208ENST00000634934 TAC4Q86UU9 113 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 MIB1Q86YT6 1006 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 SLC35F6Q8N357 371 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 ARL14EPQ8N8R7 260 aaPredicted RBP15.05■□□□□ -0
LINC00339-208ENST00000634934 SMRP1Q8NCR6 262 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 ATXN2LQ8WWM7 1075 aaKnown RBP15.05■□□□□ -0
LINC00339-208ENST00000634934 EXOC4Q96A65 974 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 ASB2Q96Q27 587 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 CYP2S1Q96SQ9 504 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 TBCBQ99426 244 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 CNPY3Q9BT09 278 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 DDIT4Q9NX09 232 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 RRN3Q9NYV6 651 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 MARCH2Q9P0N8 246 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 CALCOCO1Q9P1Z2 691 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 USTQ9Y2C2 406 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 TRAV19A0A0A6YYK7 116 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 M0QYT0 321 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 DPYSL4O14531 572 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 TRUB2O95900 331 aaKnown RBP15.04■□□□□ -0
LINC00339-208ENST00000634934 OAS1P00973 400 aaKnown RBP15.04■□□□□ -0
LINC00339-208ENST00000634934 MBL2P11226 248 aaPredicted RBP15.04■□□□□ -0
LINC00339-208ENST00000634934 IL9P15248 144 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 HDCP19113 662 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 PTPN9P43378 593 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 CKAP4Q07065 602 aaKnown RBP15.04■□□□□ -0
LINC00339-208ENST00000634934 ZNF252P-AS1Q0IIN9 211 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 CBX2Q14781 532 aaPredicted RBP15.04■□□□□ -0
LINC00339-208ENST00000634934 SH3PXD2AQ5TCZ1 1133 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 PTCRAQ6ISU1 281 aaPredicted RBP15.04■□□□□ -0
LINC00339-208ENST00000634934 ZNF572Q7Z3I7 529 aaPredicted RBP15.04■□□□□ -0
LINC00339-208ENST00000634934 RNF10Q8N5U6 811 aaKnown RBP15.04■□□□□ -0
LINC00339-208ENST00000634934 TPCN2Q8NHX9 752 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 FNIP1Q8TF40 1166 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 FAM172AQ8WUF8 416 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 SLC22A12Q96S37 553 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 NPY6RQ99463 290 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 SLC46A2Q9BY10 475 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 RNF38Q9H0F5 515 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 TASP1Q9H6P5 420 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 DNMT3LQ9UJW3 386 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 DOCK6Q96HP0 2047 aa15.04■□□□□ -0
LINC00339-208ENST00000634934 SLC12A8A0AV02 714 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 MSI1O43347 362 aaKnown RBP15.03■□□□□ -0
LINC00339-208ENST00000634934 MBTPS2O43462 519 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 BUB1BO60566 1050 aaPredicted RBP15.03■□□□□ -0
LINC00339-208ENST00000634934 PROSCO94903 275 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 CKMP06732 381 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 PRLRP16471 622 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 DDX6P26196 483 aaKnown RBP eCLIP15.03■□□□□ -0
LINC00339-208ENST00000634934 GBP1P32455 592 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 SSR1P43307 286 aaKnown RBP15.03■□□□□ -0
LINC00339-208ENST00000634934 HADHBP55084 474 aaKnown RBP15.03■□□□□ -0
LINC00339-208ENST00000634934 DEUP1Q05D60 604 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 PIGHQ14442 188 aaPredicted RBP15.03■□□□□ -0
LINC00339-208ENST00000634934 MSANTD2Q6P1R3 559 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 ZNF276Q8N554 614 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 TTC16Q8NEE8 873 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 RNF34Q969K3 372 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 NT5C3BQ969T7 300 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 CALR3Q96L12 384 aaKnown RBP15.03■□□□□ -0
LINC00339-208ENST00000634934 SERPINB11Q96P15 392 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 ADAM33Q9BZ11 813 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 SMOC2Q9H3U7 446 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 SMPD4Q9NXE4 827 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 LCMT1Q9UIC8 334 aa15.03■□□□□ -0
LINC00339-208ENST00000634934 USP15Q9Y4E8 981 aaPredicted RBP15.03■□□□□ -0
LINC00339-208ENST00000634934 RNF8O76064 485 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 HMBSP08397 361 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 BMP1P13497 986 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 RDXP35241 583 aaKnown RBP15.02■□□□□ -0
LINC00339-208ENST00000634934 AVPR1AP37288 418 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 SMAD4Q13485 552 aaKnown RBP15.02■□□□□ -0
LINC00339-208ENST00000634934 RAB6CQ53S08 254 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 OTUD1Q5VV17 481 aaPredicted RBP15.02■□□□□ -0
LINC00339-208ENST00000634934 DAB2IPQ5VWQ8 1189 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 KLHDC10Q6PID8 442 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 SND1Q7KZF4 910 aaKnown RBP eCLIP15.02■□□□□ -0
LINC00339-208ENST00000634934 DAAM2Q86T65 1068 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 ZSWIM3Q96MP5 696 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 NECTIN4Q96NY8 510 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 IRX2Q9BZI1 471 aaPredicted RBP15.02■□□□□ -0
LINC00339-208ENST00000634934 RAB6CQ9H0N0 254 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 SMG9Q9H0W8 520 aaKnown RBP15.02■□□□□ -0
LINC00339-208ENST00000634934 ACBD3Q9H3P7 528 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 GOLPH3Q9H4A6 298 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 POMKQ9H5K3 350 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.02■□□□□ -0
LINC00339-208ENST00000634934 HYOU1Q9Y4L1 999 aa15.02■□□□□ -0
LINC00339-208ENST00000634934 GRID2IPA4D2P6 1211 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 PALMO75781 387 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 F9P00740 461 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 PFKLP17858 780 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 ATXN1P54253 815 aaKnown RBP15.02□□□□□ -0.01
LINC00339-208ENST00000634934 AAK1Q2M2I8 961 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 SCYL2Q6P3W7 929 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 STRADAQ7RTN6 431 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 CPNE8Q86YQ8 564 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 NPAS3Q8IXF0 933 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms