RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 BHMTQ93088 406 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 KLF16Q9BXK1 252 aaPredicted RBP16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 TMEM121BQ9BXQ6 578 aaPredicted RBP16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 FBXO44Q9H4M3 255 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 CFAP47Q6ZTR5 3102 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 IGHV1OR15-9A0A0B4J2B8 117 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 A0A1W2PQF6 199 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 PES1O00541 588 aaKnown RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 NDUFS2O75306 463 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 ZDHHC11BP0C7U3 371 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 TBXAS1P24557 533 aaPredicted RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 EEF1GP26641 437 aaKnown RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 RDXP35241 583 aaKnown RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 YWHAEP62258 255 aaKnown RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 GOLGA8FQ08AF8 430 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 GOLGA8DPQ0D2H9 430 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 CUL2Q13617 745 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 ANO6Q4KMQ2 910 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 MINDY1Q8N5J2 469 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 IPO4Q8TEX9 1081 aaKnown RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 ZCCHC14Q8WYQ9 949 aaKnown RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 TATDN2Q93075 761 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 NT5C1AQ9BXI3 368 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 SLC6A17Q9H1V8 727 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 FAM124BQ9H5Z6 455 aaPredicted RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 SAMSN1Q9NSI8 373 aaKnown RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 PLK2Q9NYY3 685 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 WDR35Q9P2L0 1181 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 HMGXB4Q9UGU5 601 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 LSM7Q9UK45 103 aaKnown RBP16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 NUDT5Q9UKK9 219 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 KLK13Q9UKR3 277 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 STARD13Q9Y3M8 1113 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 RAD54BQ9Y620 910 aa16.34■□□□□ 0.21
SNRNP48-203ENST00000634363 SYCE3A1L190 88 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 FAM92AA1XBS5 289 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 TMEM8BA6NDV4 472 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 SRRM3A6NNA2 597 aaPredicted RBP16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 WASH3PC4AMC7 463 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 PRRT4C9JH25 899 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 ARHGAP33O14559 1287 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 CILPO75339 1184 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 ZNF217O75362 1048 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 TPM2P07951 284 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 NDUFV2P19404 249 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 HOXD12P35452 270 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 TCP11X2Q5H9J9 407 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 PIP4P1Q86T03 277 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 SLC41A1Q8IVJ1 513 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 PPM1KQ8N3J5 372 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 ANKRD20A12PQ8NF67 263 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 HSPA12BQ96MM6 686 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 ARID3AQ99856 593 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 TUBGCP2Q9BSJ2 902 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 INTS2Q9H0H0 1204 aaKnown RBP16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 CISHQ9NSE2 258 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 OSER1Q9NX31 292 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.2
SNRNP48-203ENST00000634363 MDM4O15151 490 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 CACNG3O60359 315 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 SYPP08247 313 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 FAM200BP0CF97 657 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 ACO1P21399 889 aaKnown RBP16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 MAOBP27338 520 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 DGKGP49619 791 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 FAM193AP78312 1265 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 VWA3BQ502W6 1294 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 PEAR1Q5VY43 1037 aaPredicted RBP16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 KIAA1324Q6UXG2 1013 aaKnown RBP16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 GBP6Q6ZN66 633 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 GPRIN1Q7Z2K8 1008 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 RABEPKQ7Z6M1 372 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 CRYBG2Q8N1P7 616 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 CHCHD4Q8N4Q1 142 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 EHBP1Q8NDI1 1231 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 CAPN10Q9HC96 672 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 CSNK1G1Q9HCP0 422 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 CD93Q9NPY3 652 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 NEUROG3Q9Y4Z2 214 aa16.32■□□□□ 0.2
SNRNP48-203ENST00000634363 A0A1W2PQH9 124 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 GTPBP10A4D1E9 387 aaKnown RBP16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 CYP26A1O43174 497 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 GREM1O60565 184 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 RARGP13631 454 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 PLA2G4AP47712 749 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 EXOC3L4Q17RC7 722 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 PLEKHG6Q3KR16 790 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 ZNF394Q53GI3 561 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 C10orf120Q5SQS8 335 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 CDKAL1Q5VV42 579 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 AOPEPQ8N6M6 819 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 LMO3Q8TAP4 145 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 CYFIP2Q96F07 1278 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 MRGPRX1Q96LB2 322 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 CAMK1GQ96NX5 476 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 TWNKQ96RR1 684 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 CRACR2AQ9BSW2 395 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 NDST4Q9H3R1 872 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 FANCLQ9NW38 375 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms