RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 CCDC110Q8TBZ0 833 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 NSMCE1Q8WV22 266 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 PTPRN2Q92932 1015 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SKA1Q96BD8 255 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 HSFY1Q96LI6 401 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 EBNA1BP2Q99848 306 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 FERMT1Q9BQL6 677 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 C11orf84Q9BUA3 381 aaPredicted RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 TMEM120AQ9BXJ8 343 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 KATNBL1Q9H079 304 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 C12orf65Q9H3J6 166 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 DHX35Q9H5Z1 703 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 RNPEPL1Q9HAU8 725 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 ALG13Q9NP73 1137 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 RCOR3Q9P2K3 495 aaPredicted RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 HEY2Q9UBP5 337 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 TUBGCP4Q9UGJ1 667 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 GTF2IRD1Q9UHL9 959 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 UBQLN1Q9UMX0 589 aaKnown RBP8.35□□□□□ -1.07
GPC3-204ENST00000631057 PLLPQ9Y342 182 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 SHROOM3Q8TF72 1996 aa8.35□□□□□ -1.07
GPC3-204ENST00000631057 DOCK3Q8IZD9 2030 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 PPEF2O14830 753 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 CCDC22O60826 627 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 DIAPH2O60879 1101 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 SNAI1O95863 264 aaPredicted RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 ATP5BP06576 529 aaKnown RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 MLNP12872 115 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 AXLP30530 894 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 HOXA11P31270 313 aaPredicted RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 ARL4AP40617 200 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 GCLCP48506 637 aaPredicted RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 RPL34P49207 117 aaKnown RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 CCNG1P51959 295 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 SLC8A3P57103 927 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 CDK18Q07002 472 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 DBN1Q16643 649 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 KIZQ2M2Z5 673 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 SOWAHAQ2M3V2 549 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 CTC1Q2NKJ3 1217 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 DUSP28Q4G0W2 176 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 EFHC1Q5JVL4 640 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 FBXO47Q5MNV8 452 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 ANKRD20A3Q5VUR7 823 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 C9orf57Q5W0N0 161 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 STEAP4Q687X5 459 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 HEATR6Q6AI08 1181 aaKnown RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 KCNT2Q6UVM3 1135 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 CYS1Q717R9 158 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 STRADAQ7RTN6 431 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 PSTKQ8IV42 348 aaKnown RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 HACE1Q8IYU2 909 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 CRYBG2Q8N1P7 616 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 FAM13CQ8NE31 585 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 OR6J1Q8NGC5 347 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 NSL1Q96IY1 281 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 SIGLEC10Q96LC7 697 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 C7orf26Q96N11 449 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 ZMAT2Q96NC0 199 aaKnown RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 CSPG4P5Q96PW8 444 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 B3GNT5Q9BYG0 378 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 TRIM6Q9C030 488 aaPredicted RBP8.34□□□□□ -1.07
GPC3-204ENST00000631057 ADAMTS10Q9H324 1103 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 SNX25Q9H3E2 840 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 CXorf56Q9H5V9 222 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 SLC5A4Q9NY91 659 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.34□□□□□ -1.07
GPC3-204ENST00000631057 SLC45A1Q9Y2W3 748 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 NME7Q9Y5B8 376 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 PCDHA11Q9Y5I1 949 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 MAD1L1Q9Y6D9 718 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 SCN4AP35499 1836 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 TSC2P49815 1807 aa8.34□□□□□ -1.07
GPC3-204ENST00000631057 NUP205Q92621 2012 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 A0A0A0MRY4 1105 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 CXorf49A8MYA2 514 aaPredicted RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 SPTLC1O15269 473 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 BIRC5O15392 142 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 MAP3K7O43318 606 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 PEX11AO75192 247 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 RFPL1O75677 317 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 RECQL4O94761 1208 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 METTL18O95568 372 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 DLDP09622 509 aaKnown RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 LCP1P13796 627 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 CCDC130P13994 396 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 SMPD1P17405 629 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 CALB2P22676 271 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 ADORA2BP29275 332 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 EPHB2P29323 1055 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 EPHX2P34913 555 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 CRHR1P34998 444 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 GJA5P36382 358 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 GNL1P36915 607 aaPredicted RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 CLNS1AP54105 237 aaKnown RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 GBE1Q04446 702 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms