RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 BSPRYQ5W0U4 402 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 NCBP2-AS2Q69YL0 99 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 OVOS1Q6IE37 1185 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 FOXR1Q6PIV2 292 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ADGRD1Q6QNK2 874 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 KCNT2Q6UVM3 1135 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 GLB1LQ6UWU2 654 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 VSTM1Q6UX27 236 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 C4orf50Q6ZRC1 276 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 C3orf62Q6ZUJ4 267 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 HFE2Q6ZVN8 426 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 CYS1Q717R9 158 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 PDZD4Q76G19 769 aaPredicted RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 PIGWQ7Z7B1 504 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 TRABD2AQ86V40 505 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 LRRTM3Q86VH5 581 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 PALM2Q8IXS6 379 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 CCDC13Q8IYE1 715 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 COLGALT2Q8IYK4 626 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ZBED8Q8IZ13 594 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 CNPY4Q8N129 248 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ATP11CQ8NB49 1132 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 RNF169Q8NCN4 708 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 MDM1Q8TC05 714 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 URGCPQ8TCY9 931 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ZNF473Q8WTR7 871 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 TFB1MQ8WVM0 346 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 MYLPFQ96A32 169 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ZNF317Q96PQ6 595 aaPredicted RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 QKIQ96PU8 341 aaKnown RBP eCLIP5.76□□□□□ -1.49
NEK3-211ENST00000629912 KCNK16Q96T55 309 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 DHRS4Q9BTZ2 278 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 MAGEB5Q9BZ81 275 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ZMYND15Q9H091 742 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 FAM107BQ9H098 131 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 KLC2Q9H0B6 622 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 OSBPL2Q9H1P3 480 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ETNK1Q9HBU6 452 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 SSU72Q9NP77 194 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 DMAP1Q9NPF5 467 aaPredicted RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 PPANQ9NQ55 473 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 ARHGEF4Q9NR80 690 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 RAB6BQ9NRW1 208 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 INTS9Q9NV88 658 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 TMEM30AQ9NV96 361 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 ETNK2Q9NVF9 386 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 TMEM161AQ9NX61 479 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 DTLQ9NZJ0 730 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 CACNG4Q9UBN1 327 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 HEY1Q9Y5J3 304 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.76□□□□□ -1.49
NEK3-211ENST00000629912 PATJQ8NI35 1801 aa5.76□□□□□ -1.49
NEK3-211ENST00000629912 NUP205Q92621 2012 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 CLUHO75153 1309 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 A0A1W2PQ45 241 aaPredicted RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 A0A1W2PQY0 241 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 GOLGA8MH3BSY2 632 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 I3L4J1 428 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 TNFRSF10BO14763 440 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 SYN3O14994 580 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 DCLK1O15075 740 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 PRPF4O43172 522 aaKnown RBP eCLIP5.75□□□□□ -1.49
NEK3-211ENST00000629912 TMEM63AO94886 807 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 METTL18O95568 372 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 IGLV3-25P01717 112 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 MLNP12872 115 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 BRAFP15056 766 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 SELPP16109 830 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 GOT1P17174 413 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 BDNFP23560 247 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 GRK4P32298 578 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 HTR7P34969 479 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 FDFT1P37268 417 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 MAGEA3P43357 314 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 CCT5P48643 541 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 APLP1P51693 650 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 PITX1P78337 314 aaPredicted RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 BASP1P80723 227 aaKnown RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 SARNPP82979 210 aaKnown RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 YWHAHQ04917 246 aaPredicted RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 GAD2Q05329 585 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 ZNF33AQ06730 810 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 BFSP2Q13515 415 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 SEMA5AQ13591 1074 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 MPP2Q14168 576 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 GPNMBQ14956 572 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 PRKD1Q15139 912 aaPredicted RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 PARP6Q2NL67 630 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 BBS9Q3SYG4 887 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 PLEKHG4Q58EX7 1191 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 CLLU1OSQ5K130 101 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 ANKRD20A2Q5SQ80 823 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 ANKRD20A1Q5TYW2 823 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 ANKRD20A3Q5VUR7 823 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 C6orf89Q6UWU4 347 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 ARHGEF18Q6ZSZ5 1173 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 MICALCLQ6ZW33 695 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 GPRIN1Q7Z2K8 1008 aa5.75□□□□□ -1.49
NEK3-211ENST00000629912 YTHDF3Q7Z739 585 aaKnown RBP5.75□□□□□ -1.49
NEK3-211ENST00000629912 CAND1Q86VP6 1230 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms