RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MFSD3Q96ES6 412 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TMEM209Q96SK2 561 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 CARD6Q9BX69 1037 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 RAB34Q9BZG1 259 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 NUCKS1Q9H1E3 243 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 THAP9Q9H5L6 903 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 ABHD10Q9NUJ1 306 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TAB2Q9NYJ8 693 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 MYO18AQ92614 2054 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 A0A0U1RQJ8 604 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 A0A1W2PQC6 194 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 SHISA7A6NL88 538 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 SPECC1L-ADORA2AF8WAN1 911 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TMEM189-UBE2V1I3L0A0 370 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PRAMEF12O95522 483 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 ADRB1P08588 477 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 NME1P15531 152 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TGM1P22735 817 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 EEF1GP26641 437 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 ARHGAP25P42331 645 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 LIG4P49917 911 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 GABPB1Q06547 395 aaPredicted RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 BFSP1Q12934 665 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 SLC39A12Q504Y0 691 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 EFHC2Q5JST6 749 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PRSS36Q5K4E3 855 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 SDHAF4Q5VUM1 108 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 YOD1Q5VVQ6 348 aaPredicted RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TPGS2Q68CL5 300 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PKN3Q6P5Z2 889 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 KCNK18Q7Z418 384 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 DNAJB7Q7Z6W7 309 aaPredicted RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 MAP4K3Q8IVH8 894 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 MFSD6LQ8IWD5 586 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 DAW1Q8N136 415 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 SPEM1Q8N4L4 309 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 NETO1Q8TDF5 533 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 DEPDC1BQ8WUY9 529 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 GCNAQ96QF7 691 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 LPIN3Q9BQK8 851 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 MMTAG2Q9BU76 263 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 EBF3Q9H4W6 596 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PRMT8Q9NR22 394 aaPredicted RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PCDHB10Q9UN67 800 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 FHOD1Q9Y613 1164 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 LAMA5O15230 3695 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 HELZ2Q9BYK8 2649 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PI4KAP42356 2102 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 SETXQ7Z333 2677 aaKnown RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ARHGEF37A1IGU5 675 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 DCLK1O15075 740 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 SUSD5O60279 629 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TPM1P09493 284 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 MCF2P10911 925 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 PLCG1P19174 1290 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 SPINK2P20155 84 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 EPHA1P21709 976 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 AVPR1AP37288 418 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 CREB5Q02930 508 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 PPP2R3AQ06190 1150 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 LRRC32Q14392 662 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ARHGAP15Q53QZ3 475 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 GAREM2Q75VX8 874 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TMTC1Q8IUR5 882 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 KRT222Q8N1A0 295 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 MAB21L3Q8N8X9 362 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ZNF837Q96EG3 531 aaPredicted RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 LRRC3BQ96PB8 259 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 C7orf25Q9BPX7 421 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TTYH3Q9C0H2 523 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TRPC7Q9HCX4 862 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 GKN1Q9NS71 199 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 GMIPQ9P107 970 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 FANCMQ8IYD8 2048 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 BPTFQ12830 3046 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 A0A1W2PQU0 124 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TRIM49BA6NDI0 452 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 LILRB5O75023 590 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 MOSPD3O75425 235 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TOM1L1O75674 476 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 RPP40O75818 363 aaKnown RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 C1RP00736 705 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 RPL9P32969 192 aaKnown RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 UBA7P41226 1012 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 PTSQ03393 145 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 MCL1Q07820 350 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 VEPH1Q14D04 833 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 UAP1L1Q3KQV9 507 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TMEM201Q5SNT2 666 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 PERM1Q5SV97 790 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 NAIF1Q69YI7 327 aaPredicted RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 RINT1Q6NUQ1 792 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 CC2D1AQ6P1N0 951 aaPredicted RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 LHFPL2Q6ZUX7 228 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ZSWIM2Q8NEG5 633 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 MNS1Q8NEH6 495 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ERLEC1Q96DZ1 483 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 DHTKD1Q96HY7 919 aaPredicted RBP5.13□□□□□ -1.59
LINC00550-201ENST00000629293 ASPSCR1Q9BZE9 553 aa5.13□□□□□ -1.59
LINC00550-201ENST00000629293 TRIM9Q9C026 710 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms