RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 LLGL1Q15334 1064 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 LRIT3Q3SXY7 679 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 ANKRD20A8PQ5CZ79 823 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 ZC3H12AQ5D1E8 599 aaKnown RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 RASIP1Q5U651 963 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 SDHAF4Q5VUM1 108 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 MSANTD2Q6P1R3 559 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 TTC27Q6P3X3 843 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 TMCO3Q6UWJ1 677 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CCNI2Q6ZMN8 369 aaPredicted RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 ANKS1BQ7Z6G8 1248 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 SCD5Q86SK9 330 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 TADA2BQ86TJ2 420 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 TAC4Q86UU9 113 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 JAMLQ86YT9 394 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 TCEAL8Q8IYN2 117 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CCDC185Q8N715 623 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 KLHL23Q8NBE8 558 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CCHCR1Q8TD31 782 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 HDAC7Q8WUI4 952 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 ATG4AQ8WYN0 398 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 NKD2Q969F2 451 aaPredicted RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 RNF34Q969K3 372 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 SERPINB11Q96P15 392 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 ERP44Q9BS26 406 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 HERPUD2Q9BSE4 406 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 FAM129AQ9BZQ8 928 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CRISPLD1Q9H336 500 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 DHX35Q9H5Z1 703 aaKnown RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 WDCPQ9H6R7 721 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CYP4F11Q9HBI6 524 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 EPB41L5Q9HCM4 733 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 WDR6Q9NNW5 1121 aaKnown RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 FAM114A2Q9NRY5 505 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 GPATCH2LQ9NWQ4 482 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 COX16Q9P0S2 106 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 GMIPQ9P107 970 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CALCOCO1Q9P1Z2 691 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 DRG1Q9Y295 367 aaKnown RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 R3HDM2Q9Y2K5 976 aaKnown RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 TRIOBPQ9H2D6 2365 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 BHMG1C9JSJ3 638 aaPredicted RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 C5orf67F2Z3F1 127 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 PRRG1O14668 218 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 NDC80O14777 642 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 MCF2LO15068 1137 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 LPXNO60711 386 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 LILRB3O75022 631 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ZMYND10O75800 440 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ZNF189O75820 626 aaPredicted RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 SOAT2O75908 522 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 CXCL14O95715 111 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 C1RP00736 705 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 RB1P06400 928 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ITGAVP06756 1048 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ADH1AP07327 375 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 RARGP13631 454 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ATF6P18850 670 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 DNAJB2P25686 324 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 CCR1P32246 355 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 HTR7P34969 479 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 CA8P35219 290 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 PPP3CCP48454 512 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 HCAR3P49019 387 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 NR2C2P49116 596 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 KPNA1P52294 538 aaPredicted RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 DRG2P55039 364 aaKnown RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 VCPP55072 806 aaKnown RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 USP46P62068 366 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 DYNLT1P63172 113 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ADCY2Q08462 1091 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 TAF10Q12962 218 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 MMRN1Q13201 1228 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 EIF4EBP2Q13542 120 aaPredicted RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 SNX1Q13596 522 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 PPP1R7Q15435 360 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 TAF12Q16514 161 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 CA9Q16790 459 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 PPP6R3Q5H9R7 873 aaPredicted RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 DUPD1Q68J44 220 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 SLC9A4Q6AI14 798 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 BZW1Q7L1Q6 419 aaKnown RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 TMC7Q7Z402 723 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ITIH5Q86UX2 942 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 TDHQ8IZJ6 230 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ZNF276Q8N554 614 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 ADAM32Q8TC27 787 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 GIPC2Q8TF65 315 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 CASKIN2Q8WXE0 1202 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 SEC14L1Q92503 715 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 P3H4Q92791 437 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 TRMT2BQ96GJ1 504 aaKnown RBP7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 CCDC114Q96M63 670 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 SAMD11Q96NU1 681 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 CSPG4P5Q96PW8 444 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 HAPLN3Q96S86 360 aa7.82□□□□□ -1.16
PTP4A1-206ENST00000627002 KCTD15Q96SI1 283 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms