RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 NELL1Q92832 810 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 C18orf8Q96DM3 657 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 SERPINB11Q96P15 392 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 ZSCAN32Q9NX65 697 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 TJP2Q9UDY2 1190 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 STOML2Q9UJZ1 356 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 ZFHX2Q9C0A1 2572 aaPredicted RBP17.45■□□□□ 0.38
UBE3D-208ENST00000626828 A0A1B0GTH6 734 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 GOLGA6L19H0YKK7 550 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 MSI1O43347 362 aaKnown RBP17.44■□□□□ 0.38
UBE3D-208ENST00000626828 CACNG3O60359 315 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 IGLV3-27P01718 113 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 MMEP08473 750 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 CCDC172P0C7W6 258 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 HOXA6P31267 233 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 GABRB2P47870 512 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 SLC11A2P49281 568 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 ZNF445P59923 1031 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 CDK17Q00537 523 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 CDR2Q01850 454 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 NR1I3Q14994 352 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 TAF5Q15542 800 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 PTPN20Q4JDL3 420 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 GRAMD4Q6IC98 578 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 TSSK4Q6SA08 328 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 TOGARAM2Q6ZUX3 1019 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 LUZP1Q86V48 1076 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 FAM217AQ8IXS0 508 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 MSANTD4Q8NCY6 345 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 RPLP0P6Q8NHW5 317 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 KCNV2Q8TDN2 545 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 USP33Q8TEY7 942 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 ACDQ96AP0 544 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 TMA16Q96EY4 203 aaKnown RBP17.44■□□□□ 0.38
UBE3D-208ENST00000626828 NAP1L5Q96NT1 182 aaPredicted RBP17.44■□□□□ 0.38
UBE3D-208ENST00000626828 IRX2Q9BZI1 471 aaPredicted RBP17.44■□□□□ 0.38
UBE3D-208ENST00000626828 DNAJC17Q9NVM6 304 aaKnown RBP17.44■□□□□ 0.38
UBE3D-208ENST00000626828 FBXO10Q9UK96 956 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 SLC8A2Q9UPR5 921 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 TLR6Q9Y2C9 796 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 PCDHGA2Q9Y5H1 932 aa17.44■□□□□ 0.38
UBE3D-208ENST00000626828 FANCMQ8IYD8 2048 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 A0A1W2PQC6 194 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 HSF2BPO75031 334 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 PENKP01210 267 aaPredicted RBP17.43■□□□□ 0.38
UBE3D-208ENST00000626828 ERBB2P04626 1255 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 CISD3P0C7P0 127 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 TDGF1P13385 188 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 GBP1P32455 592 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 HSF5Q4G112 596 aaPredicted RBP17.43■□□□□ 0.38
UBE3D-208ENST00000626828 MPPE1Q53F39 396 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 C2orf27AQ580R0 203 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 DCAF6Q58WW2 860 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 PKN3Q6P5Z2 889 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 FAM183BPQ6ZVS7 135 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 SYT13Q7L8C5 426 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 SLC26A9Q7LBE3 791 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 DEFB106AQ8N104 65 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 PHTF2Q8N3S3 785 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 ZBTB44Q8NCP5 570 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 ZNF397Q8NF99 534 aaPredicted RBP17.43■□□□□ 0.38
UBE3D-208ENST00000626828 DDI1Q8WTU0 396 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 PHOX2BQ99453 314 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 DDX50Q9BQ39 737 aaKnown RBP17.43■□□□□ 0.38
UBE3D-208ENST00000626828 PLK2Q9NYY3 685 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 NOCTQ9UK39 431 aaKnown RBP17.43■□□□□ 0.38
UBE3D-208ENST00000626828 MYO6Q9UM54 1294 aa17.43■□□□□ 0.38
UBE3D-208ENST00000626828 K7ESF4 209 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 ACSL4O60488 711 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 TRUB2O95900 331 aaKnown RBP17.42■□□□□ 0.38
UBE3D-208ENST00000626828 CHRNB2P17787 502 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 DGKGP49619 791 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 SEC13P55735 322 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 FANCCQ00597 558 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 KDSRQ06136 332 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 MESP2Q0VG99 397 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 FYB2Q5VWT5 728 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 OLFML1Q6UWY5 402 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 TRIM72Q6ZMU5 477 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 CAMKK1Q8N5S9 505 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 TERB1Q8NA31 727 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 CPA5Q8WXQ8 436 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 NKD2Q969F2 451 aaPredicted RBP17.42■□□□□ 0.38
UBE3D-208ENST00000626828 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 SLC2A13Q96QE2 648 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 SLC2A11Q9BYW1 496 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 TMEM51Q9NW97 253 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.42■□□□□ 0.38
UBE3D-208ENST00000626828 C2orf42Q9NWW7 574 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 RRN3Q9NYV6 651 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 SLC12A6Q9UHW9 1150 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 STARD13Q9Y3M8 1113 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 R4GN57 208 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 FAM186AA6NE01 2351 aa17.42■□□□□ 0.38
UBE3D-208ENST00000626828 IRAK2O43187 625 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 GRAP2O75791 330 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 CYP1A1P04798 512 aaPredicted RBP17.41■□□□□ 0.38
UBE3D-208ENST00000626828 SLC2A3P11169 496 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 FERP16591 822 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 NOS2P35228 1153 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms