RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 TSTD1Q8NFU3 115 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 CLEC4CQ8WTT0 213 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 SERPINB11Q96P15 392 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 NAA15Q9BXJ9 866 aaKnown RBP23.31■■□□□ 1.32
SF1-220ENST00000626028 STK33Q9BYT3 514 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 ACP6Q9NPH0 428 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 NCDNQ9UBB6 729 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 SPTBN4Q9H254 2564 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 LRRC10BA6NIK2 292 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 E5RJQ4 531 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 IRAK2O43187 625 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 LRP3O75074 770 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 RPP40O75818 363 aaKnown RBP23.3■■□□□ 1.32
SF1-220ENST00000626028 ALDH1A2O94788 518 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 CISD3P0C7P0 127 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 SLC11A2P49281 568 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 YWHAZP63104 245 aaKnown RBP23.3■■□□□ 1.32
SF1-220ENST00000626028 DRAP1Q14919 205 aaPredicted RBP23.3■■□□□ 1.32
SF1-220ENST00000626028 MPPE1Q53F39 396 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 C10orf76Q5T2E6 689 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 C11orf57Q6ZUT1 292 aaPredicted RBP23.3■■□□□ 1.32
SF1-220ENST00000626028 ZNF513Q8N8E2 541 aaPredicted RBP23.3■■□□□ 1.32
SF1-220ENST00000626028 FAM149B1Q96BN6 582 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 HHIPQ96QV1 700 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 POPDC2Q9HBU9 364 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 POLMQ9NP87 494 aaPredicted RBP23.3■■□□□ 1.32
SF1-220ENST00000626028 ASNSD1Q9NWL6 643 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 TAB2Q9NYJ8 693 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 CYTH4Q9UIA0 394 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 GMEB2Q9UKD1 530 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 TLR6Q9Y2C9 796 aa23.3■■□□□ 1.32
SF1-220ENST00000626028 PIK3R2O00459 728 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 PAPSS1O43252 624 aaPredicted RBP23.29■■□□□ 1.32
SF1-220ENST00000626028 KLF8O95600 359 aaPredicted RBP23.29■■□□□ 1.32
SF1-220ENST00000626028 FYNP06241 537 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 TIE1P35590 1138 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 RAPGEF1Q13905 1077 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 EFHC1Q5JVL4 640 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 MPP7Q5T2T1 576 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 C11orf74Q86VG3 221 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 SLC47A2Q86VL8 602 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 ZDHHC17Q8IUH5 632 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 WDTC1Q8N5D0 677 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 ALLCQ8N6M5 410 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 TXNDC5Q8NBS9 432 aaKnown RBP23.29■■□□□ 1.32
SF1-220ENST00000626028 LOXL4Q96JB6 756 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 ZC3H10Q96K80 434 aaKnown RBP23.29■■□□□ 1.32
SF1-220ENST00000626028 PPP1R13BQ96KQ4 1090 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 DDX50Q9BQ39 737 aaKnown RBP23.29■■□□□ 1.32
SF1-220ENST00000626028 HINFPQ9BQA5 517 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 LIMA1Q9UHB6 759 aaKnown RBP23.29■■□□□ 1.32
SF1-220ENST00000626028 AJAP1Q9UKB5 411 aaPredicted RBP23.29■■□□□ 1.32
SF1-220ENST00000626028 THADAQ6YHU6 1953 aa23.29■■□□□ 1.32
SF1-220ENST00000626028 NUP205Q92621 2012 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 GFRA2O00451 464 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 CAPN9O14815 690 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 RETP07949 1114 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 HNRNPLP14866 589 aaKnown RBP eCLIP23.28■■□□□ 1.32
SF1-220ENST00000626028 TBX4P57082 545 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 TYRO3Q06418 890 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 CEP68Q76N32 757 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 CACNA2D4Q7Z3S7 1137 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 SFTPA1Q8IWL2 248 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 CCDC33Q8N5R6 958 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 ZNF557Q8N988 423 aaPredicted RBP23.28■■□□□ 1.32
SF1-220ENST00000626028 BPIFA3Q9BQP9 254 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 LSM14BQ9BX40 385 aaKnown RBP23.28■■□□□ 1.32
SF1-220ENST00000626028 VPS16Q9H269 839 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 TMEM51Q9NW97 253 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 TMEM63CQ9P1W3 806 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 FHOD1Q9Y613 1164 aa23.28■■□□□ 1.32
SF1-220ENST00000626028 CEP192Q8TEP8 1941 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 CKAP5Q14008 2032 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 MSI1O43347 362 aaKnown RBP23.27■■□□□ 1.32
SF1-220ENST00000626028 CYP11B1P15538 503 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 ZNF18P17022 549 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 NTSR1P30989 418 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 CDH5P33151 784 aaPredicted RBP23.27■■□□□ 1.32
SF1-220ENST00000626028 MTA1Q13330 715 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 EIF4HQ15056 248 aaKnown RBP23.27■■□□□ 1.32
SF1-220ENST00000626028 SDE2Q6IQ49 451 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 PRR23BQ6ZRT6 265 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 TMEM35BQ8NCS4 154 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 C1orf131Q8NDD1 294 aaKnown RBP23.27■■□□□ 1.32
SF1-220ENST00000626028 DQX1Q8TE96 717 aaKnown RBP23.27■■□□□ 1.32
SF1-220ENST00000626028 DDI1Q8WTU0 396 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 DMXL1Q9Y485 3027 aa23.27■■□□□ 1.32
SF1-220ENST00000626028 F8VZ95 297 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 SGK1O00141 431 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 TIMM44O43615 452 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 FOXD2O60548 495 aaPredicted RBP23.26■■□□□ 1.31
SF1-220ENST00000626028 HSF2BPO75031 334 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 ADAM23O75077 832 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 LSM8O95777 96 aaKnown RBP23.26■■□□□ 1.31
SF1-220ENST00000626028 USP39Q53GS9 565 aaKnown RBP23.26■■□□□ 1.31
SF1-220ENST00000626028 EMC10Q5UCC4 262 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 TOGARAM2Q6ZUX3 1019 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.26■■□□□ 1.31
SF1-220ENST00000626028 ZNF677Q86XU0 584 aa23.26■■□□□ 1.31
SF1-220ENST00000626028 IPO4Q8TEX9 1081 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms