RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 CLEC18AA5D8T8 446 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 SRRM3A6NNA2 597 aaPredicted RBP4.07□□□□□ -1.76
TCF4-250ENST00000625849 AGPSO00116 658 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 RECQLP46063 649 aaPredicted RBP4.07□□□□□ -1.76
TCF4-250ENST00000625849 PCYT1AP49585 367 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 SLC13A2Q13183 592 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 FGL2Q14314 439 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 CEP85LQ5SZL2 805 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 FAM83HQ6ZRV2 1179 aaPredicted RBP4.07□□□□□ -1.76
TCF4-250ENST00000625849 C11orf44Q8N8P7 122 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 PRR26Q8N8Z3 221 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 CLEC18CQ8NCF0 446 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 CENPIQ92674 756 aaPredicted RBP4.07□□□□□ -1.76
TCF4-250ENST00000625849 INPP5DQ92835 1189 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 EME1Q96AY2 570 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 CGRRF1Q99675 332 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 HTATIP2Q9BUP3 242 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 DPH1Q9BZG8 443 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 SPRY4Q9C004 299 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 DCLK3Q9C098 648 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 VPS45Q9NRW7 570 aa4.07□□□□□ -1.76
TCF4-250ENST00000625849 TNKSO95271 1327 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 CCP110O43303 1012 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 TBC1D4O60343 1298 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 PPP1R3DO95685 299 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 IFNA2P01563 188 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 MBPP02686 304 aaPredicted RBP4.06□□□□□ -1.76
TCF4-250ENST00000625849 PARP1P09874 1014 aaKnown RBP4.06□□□□□ -1.76
TCF4-250ENST00000625849 CPA1P15085 419 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 GUCY2FP51841 1108 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 EIF4A1P60842 406 aaKnown RBP4.06□□□□□ -1.76
TCF4-250ENST00000625849 RAB1AP62820 205 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 POU3F1Q03052 451 aaPredicted RBP4.06□□□□□ -1.76
TCF4-250ENST00000625849 GAD2Q05329 585 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 ZNF672Q499Z4 452 aaPredicted RBP4.06□□□□□ -1.76
TCF4-250ENST00000625849 C9orf57Q5W0N0 161 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 C16orf82Q7Z2V1 217 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 MTERF4Q7Z6M4 381 aaKnown RBP4.06□□□□□ -1.76
TCF4-250ENST00000625849 KAT2BQ92831 832 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 ELOVL1Q9BW60 279 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 PDCL3Q9H2J4 239 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 TASP1Q9H6P5 420 aa4.06□□□□□ -1.76
TCF4-250ENST00000625849 SIRT3Q9NTG7 399 aaPredicted RBP4.06□□□□□ -1.76
TCF4-250ENST00000625849 G3BP2Q9UN86 482 aaKnown RBP4.06□□□□□ -1.76
TCF4-250ENST00000625849 LOC102723971A0A1B0GUV8 181 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 CCER2I3L3R5 266 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 ALDH2P05091 517 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 HSP90AA1P07900 732 aaKnown RBP4.05□□□□□ -1.76
TCF4-250ENST00000625849 TMIGD3P0DMS9 266 aaPredicted RBP4.05□□□□□ -1.76
TCF4-250ENST00000625849 NPR1P16066 1061 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 SOX2P48431 317 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 VPS41P49754 854 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 CNGA3Q16281 694 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 TAF3Q5VWG9 929 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.05□□□□□ -1.76
TCF4-250ENST00000625849 USP49Q70CQ1 688 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 SPSB4Q96A44 273 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 TTLL2Q9BWV7 592 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 AAMDCQ9H7C9 122 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 IPO11Q9UI26 975 aaKnown RBP4.05□□□□□ -1.76
TCF4-250ENST00000625849 MAGED2Q9UNF1 606 aaPredicted RBP4.05□□□□□ -1.76
TCF4-250ENST00000625849 ATP8A1Q9Y2Q0 1164 aa4.05□□□□□ -1.76
TCF4-250ENST00000625849 CFAP65Q6ZU64 1925 aaKnown RBP4.05□□□□□ -1.76
TCF4-250ENST00000625849 DOCK7Q96N67 2140 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 OR6C75A6NL08 312 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 H7C4K7 107 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 PIAS2O75928 621 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 TPM2P07951 284 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 SP1P08047 785 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 KLRC1P26715 233 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 PTDSS1P48651 473 aaKnown RBP4.04□□□□□ -1.76
TCF4-250ENST00000625849 ITGA8P53708 1063 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 DLX5P56178 289 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 ISM2Q6H9L7 571 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 ARMC9Q7Z3E5 817 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 MUC20Q8N307 709 aaPredicted RBP4.04□□□□□ -1.76
TCF4-250ENST00000625849 C7orf57Q8NEG2 295 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 ZNF668Q96K58 619 aaPredicted RBP4.04□□□□□ -1.76
TCF4-250ENST00000625849 SENP7Q9BQF6 1050 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 ISCUQ9H1K1 167 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 SMURF2Q9HAU4 748 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.04□□□□□ -1.76
TCF4-250ENST00000625849 PLEKHB1Q9UF11 243 aaPredicted RBP4.04□□□□□ -1.76
TCF4-250ENST00000625849 LAS1LQ9Y4W2 734 aaKnown RBP4.04□□□□□ -1.76
TCF4-250ENST00000625849 PAXBP1Q9Y5B6 917 aa4.04□□□□□ -1.76
TCF4-250ENST00000625849 VIRMAQ69YN4 1812 aaKnown RBP4.03□□□□□ -1.76
TCF4-250ENST00000625849 A0A088AWK7 358 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 PRR23AA6NEV1 266 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 ANTXRLA6NF34 631 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 MDM4O15151 490 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 AP1G1O43747 822 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 KATNA1O75449 491 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 IL33O95760 270 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 CDK11BP21127 795 aaKnown RBP4.03□□□□□ -1.76
TCF4-250ENST00000625849 CLCN5P51795 746 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 AGFG1P52594 562 aaKnown RBP4.03□□□□□ -1.76
TCF4-250ENST00000625849 TERF1P54274 439 aa4.03□□□□□ -1.76
TCF4-250ENST00000625849 RAE1P78406 368 aaKnown RBP4.03□□□□□ -1.76
TCF4-250ENST00000625849 DNASE1L3Q13609 305 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms