RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CACNA2D1P54289 1103 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 CSTF1Q05048 431 aaKnown RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 TNK2Q07912 1038 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 INCA1Q0VD86 236 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 GRSF1Q12849 480 aaKnown RBP eCLIP6.75□□□□□ -1.33
TCF4-249ENST00000625716 LRMPQ12912 555 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 RUNX3Q13761 415 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 MTF1Q14872 753 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 PON2Q15165 354 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 HECTD3Q5T447 861 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 TRIM68Q6AZZ1 485 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 FOXR2Q6PJQ5 311 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 PAQR9Q6ZVX9 377 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 DDX42Q86XP3 938 aaKnown RBP eCLIP6.75□□□□□ -1.33
TCF4-249ENST00000625716 ZC3H3Q8IXZ2 948 aaKnown RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 FUKQ8N0W3 1084 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 C12orf29Q8N999 325 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 SH3RF2Q8TEC5 729 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 OSCP1Q8WVF1 389 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 SEMA4DQ92854 862 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 ATP2A3Q93084 1043 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 NKD2Q969F2 451 aaPredicted RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 SLC35C1Q96A29 364 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 JAKMIP2Q96AA8 810 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 CLDN23Q96B33 292 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 TMEM176AQ96HP8 235 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 NSUN5Q96P11 429 aaKnown RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 LRRC3BQ96PB8 259 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 GBP4Q96PP9 640 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 HNRNPABQ99729 332 aaKnown RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 SMOQ99835 787 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 IER2Q9BTL4 223 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 SRRTQ9BXP5 876 aaKnown RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 EBF3Q9H4W6 596 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 TLR8Q9NR97 1041 aaKnown RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 CISHQ9NSE2 258 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 GCNT4Q9P109 453 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 DLGAP2Q9P1A6 1054 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 HMGXB4Q9UGU5 601 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 CHORDC1Q9UHD1 332 aaPredicted RBP6.75□□□□□ -1.33
TCF4-249ENST00000625716 FBXO4Q9UKT5 387 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 ARHGAP26Q9UNA1 814 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 NCANO14594 1321 aa6.75□□□□□ -1.33
TCF4-249ENST00000625716 LEFTY2O00292 366 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 ARNTLO00327 626 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 P4HA2O15460 535 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 NFATC1O95644 943 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 AFPP02771 609 aaKnown RBP6.74□□□□□ -1.33
TCF4-249ENST00000625716 SP9P0CG40 484 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CD19P15391 556 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 ACO1P21399 889 aaKnown RBP6.74□□□□□ -1.33
TCF4-249ENST00000625716 NBL1P41271 181 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CCR3P51677 355 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 SLC7A9P82251 487 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 GOLGA8FQ08AF8 430 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 GOLGA8DPQ0D2H9 430 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 MTAPQ13126 283 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CUL2Q13617 745 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 ZNF77Q15935 545 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 ZNF528Q3MIS6 628 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CBWD6Q4V339 395 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 SGO2Q562F6 1265 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CBWD3Q5JTY5 395 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CBWD5Q5RIA9 395 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 TTI2Q6NXR4 508 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CLEC20AQ6ZU45 233 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 TADA2BQ86TJ2 420 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 SYNPOQ8N3V7 929 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 MLKLQ8NB16 471 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CCDC26Q8TAB7 109 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 SCAMP5Q8TAC9 235 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 ATRIPQ8WXE1 791 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 NT5C1BQ96P26 610 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 TWNKQ96RR1 684 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 SLC22A12Q96S37 553 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 DUSP9Q99956 384 aaKnown RBP6.74□□□□□ -1.33
TCF4-249ENST00000625716 FAM83CQ9BQN1 747 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 DUSP16Q9BY84 665 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 SEMA4AQ9H3S1 761 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CLSTN2Q9H4D0 955 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CSNK1G1Q9HCP0 422 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 ZFP64Q9NPA5 681 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 TMEM30AQ9NV96 361 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 SMPD4Q9NXE4 827 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 CFAP97Q9P2B7 532 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 TBC1D14Q9P2M4 693 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 HESX1Q9UBX0 185 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 RWDD2AQ9UIY3 292 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 KIAA1257Q9ULG3 409 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 COQ4Q9Y3A0 265 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 SH3BP1Q9Y3L3 701 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.74□□□□□ -1.33
TCF4-249ENST00000625716 CPQQ9Y646 472 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 WNT6Q9Y6F9 365 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 KMT2EQ8IZD2 1858 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 DOCK6Q96HP0 2047 aa6.74□□□□□ -1.33
TCF4-249ENST00000625716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.73□□□□□ -1.33
TCF4-249ENST00000625716 PMM2O15305 246 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 HYAL3O43820 417 aaPredicted RBP6.73□□□□□ -1.33
TCF4-249ENST00000625716 ATG13O75143 517 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms