RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 C7orf43Q8WVR3 580 aa12.09□□□□□ -0.47
CHD2-205ENST00000625662 POLR1EQ9GZS1 481 aaKnown RBP12.09□□□□□ -0.47
CHD2-205ENST00000625662 IL25Q9H293 177 aa12.09□□□□□ -0.47
CHD2-205ENST00000625662 TRMT13Q9NUP7 481 aaKnown RBP12.09□□□□□ -0.47
CHD2-205ENST00000625662 UBAP1Q9NZ09 502 aa12.09□□□□□ -0.47
CHD2-205ENST00000625662 LRRC72A6NJI9 287 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 TADA3O75528 432 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 SYN1P17600 705 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 CYP2A7P20853 494 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ITGB3BPQ13352 177 aaPredicted RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 CCL14Q16627 93 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 C9orf57Q5W0N0 161 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 DDIASQ8IXT1 998 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ZBTB45Q96K62 511 aaPredicted RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 HSD17B14Q9BPX1 270 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 CNTNAP1P78357 1384 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 MMEP08473 750 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 NFICP08651 508 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ALPPL2P10696 532 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 MAPK1P28482 360 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ERVK-21P61565 698 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 GAD2Q05329 585 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 FAM83EQ2M2I3 478 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 SMTNL2Q2TAL5 461 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 TRIM60Q495X7 471 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 EPC2Q52LR7 807 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 TTI2Q6NXR4 508 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 TRMT10CQ7L0Y3 403 aaKnown RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 PRPF39Q86UA1 669 aaKnown RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 PURBQ96QR8 312 aaKnown RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 IL23AQ9NPF7 189 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 F8VZ95 297 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 CACNB4O00305 520 aaPredicted RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 PRMT3O60678 531 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 PYGBP11216 843 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 PDCLQ13371 301 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ARMC2Q8NEN0 867 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 WFIKKN2Q8TEU8 576 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ACDQ96AP0 544 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ZNF669Q96BR6 464 aaPredicted RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 CCDC126Q96EE4 140 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 RAD9AQ99638 391 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 SYCE1LA8MT33 242 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 GLP2RO95838 553 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 CCDC130P13994 396 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 ALOX15P16050 662 aaPredicted RBP12.08□□□□□ -0.48
CHD2-205ENST00000625662 FNTAP49354 379 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 RD3Q7Z3Z2 195 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 CCDC197Q8NCU1 140 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 CARD9Q9H257 536 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 COMMD8Q9NX08 183 aa12.08□□□□□ -0.48
CHD2-205ENST00000625662 A0A0A6YYK5 440 aaPredicted RBP12.07□□□□□ -0.48
CHD2-205ENST00000625662 CCL16O15467 120 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 TLR5O60602 858 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 TBL1XO60907 577 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 CCND3P30281 292 aaPredicted RBP12.07□□□□□ -0.48
CHD2-205ENST00000625662 C1QTNF8P60827 252 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 STK40Q8N2I9 435 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ZNF784Q8NCA9 323 aaPredicted RBP12.07□□□□□ -0.48
CHD2-205ENST00000625662 PHC3Q8NDX5 983 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 GBP5Q96PP8 586 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ZYG11BQ9C0D3 744 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 CERS4Q9HA82 394 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 FANCEQ9HB96 536 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 AVENQ9NQS1 362 aaPredicted RBP12.07□□□□□ -0.48
CHD2-205ENST00000625662 AHSPQ9NZD4 102 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 KPNA5O15131 536 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 SLCO1A2P46721 670 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 KCNA1Q09470 495 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ZNF792Q3KQV3 632 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ILDR2Q71H61 639 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 EPM2AIP1Q7L775 607 aaPredicted RBP12.07□□□□□ -0.48
CHD2-205ENST00000625662 NUDCD3Q8IVD9 361 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 C17orf53Q8N3J3 647 aaPredicted RBP12.07□□□□□ -0.48
CHD2-205ENST00000625662 HEXDCQ8WVB3 486 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ABCG4Q9H172 646 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 SMARCAL1Q9NZC9 954 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ERVW-1Q9UQF0 538 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 TMEM150BA6NC51 233 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ANKRD63C9JTQ0 380 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 XPO1O14980 1071 aaKnown RBP12.07□□□□□ -0.48
CHD2-205ENST00000625662 B4GALT4O60513 344 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 TRUB2O95900 331 aaKnown RBP12.07□□□□□ -0.48
CHD2-205ENST00000625662 KRT20P35900 424 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 MAPK9P45984 424 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 DAB2P98082 770 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 TEDDM1Q5T9Z0 273 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 AGAP9Q5VTM2 703 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ANO5Q75V66 913 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 FAM35AQ86V20 835 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 IRGQQ8WZA9 623 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 FAR2Q96K12 515 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 ZDHHC6Q9H6R6 413 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 AGPAT5Q9NUQ2 364 aa12.07□□□□□ -0.48
CHD2-205ENST00000625662 HES2Q9Y543 173 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms