RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 SLC12A8A0AV02 714 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 SRRM3A6NNA2 597 aaPredicted RBP19.89■□□□□ 0.77
SMN1-211ENST00000625245 H0Y626 953 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 SH3BP5O60239 455 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 TRIM16O95361 564 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 NDUFA8P51970 172 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 KRT39Q6A163 491 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 ARHGAP18Q8N392 663 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 SEMA4DQ92854 862 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 MKRN2Q9H000 416 aaKnown RBP19.89■□□□□ 0.77
SMN1-211ENST00000625245 MIR1-1HGQ9H1L0 117 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 THAP10Q9P2Z0 257 aaPredicted RBP19.89■□□□□ 0.77
SMN1-211ENST00000625245 STRIP2Q9ULQ0 834 aa19.89■□□□□ 0.77
SMN1-211ENST00000625245 NPC1O15118 1278 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 NCAM1P13591 858 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 DPYDQ12882 1025 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 HNRNPDQ14103 355 aaKnown RBP19.88■□□□□ 0.77
SMN1-211ENST00000625245 TRIP6Q15654 476 aaKnown RBP19.88■□□□□ 0.77
SMN1-211ENST00000625245 ANKS1BQ7Z6G8 1248 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 PIGZQ86VD9 579 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 TMPRSS6Q8IU80 811 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 GUF1Q8N442 669 aaKnown RBP19.88■□□□□ 0.77
SMN1-211ENST00000625245 DDI1Q8WTU0 396 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 SIPA1Q96FS4 1042 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 EEF2KMTQ96G04 330 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 TMEM176AQ96HP8 235 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 CIPCQ9C0C6 399 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 ITM2CQ9NQX7 267 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 CISHQ9NSE2 258 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 ELOVL2Q9NXB9 296 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 WSB2Q9NYS7 404 aaPredicted RBP19.88■□□□□ 0.77
SMN1-211ENST00000625245 CLEC4EQ9ULY5 219 aa19.88■□□□□ 0.77
SMN1-211ENST00000625245 GTF2H1P32780 548 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 RAD23BP54727 409 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 SLC8A3P57103 927 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 YWHAGP61981 247 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMN1-211ENST00000625245 KRT85P78386 507 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 ARID5AQ03989 594 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 ENPEPQ07075 957 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 GRIK2Q13002 908 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 SLC14A1Q13336 389 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 ZNF234Q14588 700 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 ZNF423Q2M1K9 1284 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 METTL3Q86U44 580 aaKnown RBP19.87■□□□□ 0.77
SMN1-211ENST00000625245 CACUL1Q86Y37 369 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 ZCCHC9Q8N567 271 aaKnown RBP19.87■□□□□ 0.77
SMN1-211ENST00000625245 TTC39CQ8N584 583 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 SLC4A11Q8NBS3 891 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 SORCS1Q8WY21 1168 aa19.87■□□□□ 0.77
SMN1-211ENST00000625245 NDRG1Q92597 394 aaKnown RBP19.87■□□□□ 0.77
SMN1-211ENST00000625245 PIWIL1Q96J94 861 aaKnown RBP19.87■□□□□ 0.77
SMN1-211ENST00000625245 USP36Q9P275 1121 aaKnown RBP19.87■□□□□ 0.77
SMN1-211ENST00000625245 A0A1B0GTW7 788 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 KCNJ18B7U540 433 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 ACADMP11310 421 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 OXTRP30559 389 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 MXI1P50539 228 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 TPMTP51580 245 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 TKTL1P51854 596 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 ZNF132P52740 706 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 E2F5Q15329 346 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 DCAF12L1Q5VU92 463 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 NAXDQ8IW45 347 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 FBXL13Q8NEE6 735 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 PRCCQ92733 491 aaPredicted RBP19.86■□□□□ 0.77
SMN1-211ENST00000625245 TATDN2Q93075 761 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 ARID3AQ99856 593 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 UBXN6Q9BZV1 441 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 RAB20Q9NX57 234 aa19.86■□□□□ 0.77
SMN1-211ENST00000625245 CKAP5Q14008 2032 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 TSPAN3O60637 253 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 GJB3O75712 270 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 EPHX1P07099 455 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 PRKCHP24723 683 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 ENPP2Q13822 863 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 RAB41Q5JT25 222 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 ARHGAP17Q68EM7 881 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 SERPINA13PQ6UXR4 307 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 KRBA2Q6ZNG9 492 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 RAB44Q7Z6P3 723 aaPredicted RBP19.85■□□□□ 0.77
SMN1-211ENST00000625245 CPXM2Q8N436 756 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 PNPLA1Q8N8W4 532 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 ANKRD52Q8NB46 1076 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 DNASE2BQ8WZ79 361 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 ZDHHC5Q9C0B5 715 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 ASPMQ8IZT6 3477 aa19.85■□□□□ 0.77
SMN1-211ENST00000625245 STX10O60499 249 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 ZBED1O96006 694 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 EPB41P11171 864 aaKnown RBP19.84■□□□□ 0.77
SMN1-211ENST00000625245 GOLGA7BQ2TAP0 167 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 FAM124AQ86V42 546 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 FMNL3Q8IVF7 1028 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 SMYD4Q8IYR2 804 aaPredicted RBP19.84■□□□□ 0.77
SMN1-211ENST00000625245 CADM4Q8NFZ8 388 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 SETD7Q8WTS6 366 aaKnown RBP19.84■□□□□ 0.77
SMN1-211ENST00000625245 PLD4Q96BZ4 506 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 FAXDC2Q96IV6 333 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 NUP58Q9BVL2 599 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 SLC2A11Q9BYW1 496 aa19.84■□□□□ 0.77
SMN1-211ENST00000625245 ULBP1Q9BZM6 244 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms