RNA–Protein interactions for RNA: ENST00000624693.1

C11orf49-223, Transcript of chromosome 11 open reading frame 49, human

Gene C11orf49, Length 2,141 nt, Biotype TEC.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-223	ENST00000624693	SRPK1	Q96SB4	655 aa	Known RBP	13.19	□□□□□ -0.3
C11orf49-223	ENST00000624693	KATNBL1	Q9H079	304 aa		13.19	□□□□□ -0.3
C11orf49-223	ENST00000624693	ABHD16B	Q9H3Z7	469 aa		13.19	□□□□□ -0.3
C11orf49-223	ENST00000624693	PARVA	Q9NVD7	372 aa		13.19	□□□□□ -0.3
C11orf49-223	ENST00000624693	BCAP29	Q9UHQ4	241 aa		13.19	□□□□□ -0.3
C11orf49-223	ENST00000624693	ZNHIT2	Q9UHR6	403 aa		13.19	□□□□□ -0.3
C11orf49-223	ENST00000624693	TBX20	Q9UMR3	447 aa		13.19	□□□□□ -0.3
C11orf49-223	ENST00000624693	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	TMEM88B	A6NKF7	163 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	PRR5-ARHGAP8	B1AHC4	643 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	SNN	O75324	88 aa	Predicted RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	COPA	P53621	1224 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	ARHGAP8	P85298	464 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	PPID	Q08752	370 aa	Known RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	MAP2K5	Q13163	448 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	MORN1	Q5T089	497 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	SPOCD1	Q6ZMY3	1216 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	RNF111	Q6ZNA4	994 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	KBTBD6	Q86V97	674 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	SLC26A11	Q86WA9	606 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	WDR75	Q8IWA0	830 aa	Known RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	FEZF2	Q8TBJ5	459 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	CPT1B	Q92523	772 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	ABTB1	Q969K4	478 aa	Predicted RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	TMEM143	Q96AN5	459 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	BIRC8	Q96P09	236 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	KLF6	Q99612	283 aa	Predicted RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	KIFC3	Q9BVG8	833 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	DOCK3	Q8IZD9	2030 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	C2orf71	A6NGG8	1288 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693		E5RJQ4	531 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	TLR3	O15455	904 aa	Known RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	CBFA2T3	O75081	653 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	KRT1	P04264	644 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	SNRPA	P09012	282 aa	Known RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	ETS1	P14921	441 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	PRDX6	P30041	224 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	SERPINB6	P35237	376 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	ADCYAP1R1	P41586	468 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	ALDH1A3	P47895	512 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	LRRC36	Q1X8D7	754 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	FNBP1L	Q5T0N5	605 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	TRIM50	Q86XT4	487 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	NUDCD3	Q8IVD9	361 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	EXOC8	Q8IYI6	725 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	SLC25A41	Q8N5S1	370 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	CPA5	Q8WXQ8	436 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	CMTM5	Q96DZ9	223 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	HHIPL1	Q96JK4	782 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	KCNK16	Q96T55	309 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	HAUS8	Q9BT25	410 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	ADAM33	Q9BZ11	813 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	C12orf65	Q9H3J6	166 aa	Known RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	NRDE2	Q9H7Z3	1164 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	THAP1	Q9NVV9	213 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	PSMD13	Q9UNM6	376 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	ZNF232	Q9UNY5	417 aa		13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	HBS1L	Q9Y450	684 aa	Known RBP	13.18	□□□□□ -0.3
C11orf49-223	ENST00000624693	hCG_1818297	A0A087WSY0	165 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	DNAJA2	O60884	412 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	MAF	O75444	373 aa	Predicted RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	ATF7	P17544	494 aa	Predicted RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	PML	P29590	882 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	ALDH18A1	P54886	795 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	HDAC4	P56524	1084 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	FAAP100	Q0VG06	881 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	SNRNP35	Q16560	246 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	GRAMD1B	Q3KR37	738 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	TEX44	Q53QW1	395 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	RARS2	Q5T160	578 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	GJC2	Q5T442	439 aa	Predicted RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	KAZN	Q674X7	775 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	FBXL19	Q6PCT2	694 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	DHRS4L2	Q6PKH6	230 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	MFSD7	Q6UXD7	560 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	MAP4K3	Q8IVH8	894 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	EMID1	Q96A84	441 aa	Predicted RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	DNAJC1	Q96KC8	554 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	PLGRKT	Q9HBL7	147 aa		13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	DDX18	Q9NVP1	670 aa	Known RBP	13.17	□□□□□ -0.3
C11orf49-223	ENST00000624693	hCG_2014768	A0A024R1R8	64 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	TRDMT1	O14717	391 aa	Known RBP	13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	IFNB1	P01574	187 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	C6orf222	P0C671	652 aa	Predicted RBP	13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	KRT10	P13645	584 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	RAG1	P15918	1043 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	ARL2	P36404	184 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	TM4SF4	P48230	202 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	NCOA4	Q13772	614 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	APOF	Q13790	326 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	TLR1	Q15399	786 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	MYLK3	Q32MK0	819 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	RABGAP1L	Q5R372	815 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	STXBP5	Q5T5C0	1151 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	IQSEC1	Q6DN90	963 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693	ZFP1	Q6P2D0	407 aa		13.16	□□□□□ -0.3
C11orf49-223	ENST00000624693		Q6ZNX1	250 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms